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View Structure Prediction Details

Protein: gi|114598920
Organism: Pan troglodytes
Length: 135 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114598920.

Description E-value Query
Range
Subject
Range
gi|50736031 - gi|50736031|ref|XP_419024.1| PREDICTED: similar to DNA segment, Chr 13, Wayne State University 50, e...
7.0E-56 [1..134] [74..207]
gi|149032766, gi... - gi|62663090|ref|XP_214417.3| PREDICTED: similar to Mediator complex subunit 10 CG5057-PA [Rattus nor...
MED10_MOUSE - Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus GN=Med10 PE=1 SV=1
3.0E-54 [1..135] [1..135]
MED10_XENTR - Mediator of RNA polymerase II transcription subunit 10 OS=Xenopus tropicalis GN=med10 PE=2 SV=1
1.0E-53 [1..135] [1..135]
CCDS34134.1_1 - null
gi|109076692 - gi|109076692|ref|XP_001082923.1| PREDICTED: similar to Mediator complex subunit 10 CG5057-PA [Macaca...
2.0E-53 [1..135] [1..135]
MED10_XENLA - Mediator of RNA polymerase II transcription subunit 10 OS=Xenopus laevis GN=med10 PE=2 SV=1
2.0E-53 [1..135] [1..135]
MED10_MACFA - Mediator of RNA polymerase II transcription subunit 10 OS=Macaca fascicularis GN=MED10 PE=2 SV=1
4.0E-53 [1..135] [1..135]
gi|62202758, gi|... - gi|62955367|ref|NP_001017699.1| transcriptional mediator complex subunit 10 [Danio rerio], gi|622027...
1.0E-49 [1..135] [1..134]
gi|47229507 - gi|47229507|emb|CAF99495.1| unnamed protein product [Tetraodon nigroviridis]
7.0E-47 [1..131] [1..131]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKFDHLEE HLEKFVENIR QLGIIVSDFQ PSSQAGLNQK LNFIVTGLQD IDKCRQQLHD  60
   61 ITVPLEVFEY IDQGRNPQLY TKECLERALA KNEQVKGKID TMKKFKSLLI QELSKVFPED 120
  121 MAKYRSIRGE DHPPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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