| Protein: | gi|125526052 |
| Organism: | Oryza sativa Indica Group |
| Length: | 625 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125526052.
| Description | E-value | Query Range |
Subject Range |
|
|
355.0 | [0..248] | [597..56] |
|
Region A: Residues: [1-246] |
1 11 21 31 41 51
| | | | | |
1 MEANGVIPDV MMPSLLADVE VSHLAGFDVT PSPHAEPSPR PQLRHDNPSR SRVPPLERVS 60
61 RRSEVVFPPL DSPFQAPGYR SVQPVSISLP ASPTGFGVPV ALPIAVGDAG EPADLRRQAM 120
121 SNAARDAEEQ QLAAQGKGSN NNVRFVQPDK VVFRSQPIPG GKPARRAASN RGGRMMSRDR 180
181 RYDSFKTWSG KLERQLTHLA GAGPEVPEEE EDGCDGDAIS SHHTKSMPQV DRFFAALEGP 240
241 ELDKLR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [247-625] |
1 11 21 31 41 51
| | | | | |
1 SSEELVLPSD KTWPFLLRFP VSAFGICLGV SSQAILWKTV ATSTPTRFLH VTTKVNLVLW 60
61 CVSLALMCVI AAIYACKVVF FFEAVRREYY HPIRVNFFFA PWIACLFLAI GVPPSVATEL 120
121 PRWLWYALMT PILCMELKIY GQWMSGGQRR LSKVANPSNH LSVVGNFVGA LLGASMGLKE 180
181 GPVFFFSVGL AHYTVLFVTL YQRLPTNETL PKELHPVFFL FVAAPSVACM AWAKITGEFG 240
241 LGSRVAYFIA MFLYASLAVR INFFRGFRFS LAWWAYTFPM TGAAIASIRY STEVDNAFTK 300
301 ALCVALSVLA MLTVLALLAT TIVHGFVLRN LFPNDISIAI TERKVKPIVE LHEMLGSNDS 360
361 AAGRSNDDIE AGVATVESS
|
| Detection Method: | |
| Confidence: | 86.0 |
| Match: | 1bccC |
| Description: | Mitochondrial cytochrome b subunit, C-terminal domain; Mitochondrial cytochrome b subunit, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.663361910631013 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.17038047578982 | bayes_pls_golite062009 |
