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View Structure Prediction Details

Protein: gi|125563126
Organism: Oryza sativa Indica Group
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125563126.

Description E-value Query
Range
Subject
Range
gi|7489170, gi|1... - pir||T03819 phosphate/phosphoenolpyruvate translocator precursor, plastid - common tobacco, gi|1778...
178.0 [0..1] [408..1]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSAAAVGLL RPCGATTAAA PLQLRNPSPR GFGVGVGQPL LPPRGLRLSA VAPRAGISAR  60
   61 RIGLVPASPE QEDERRRGAR DVAVAATAAA AGEAGAEEG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-247]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGLAKTLQLG ALFGLWYLFN IYFNIYNKQV LKVFPYPINI TNVQFAVGTV IALFMWITGI  60
   61 LKRPKISGAQ LAAILPLAMV HTMGNLFTNM SLGKVAVSFT HTIKAMEPFF SVLLSALFLG 120
  121 EMPTPFVVLS LVPIVGGVAL ASLTEASF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.55
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [248-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWAGFWSAMA SNVTFQSRNV LSKKLMVKKE ESLDNITLFS IITVMSFFLL APVTLLTEGV  60
   61 KVTPTVLQSA GLNLKQIYTR SLIAAFCFHA YQQVSYMILA RVSPVTHSVG NCVKRVVVIV 120
  121 TSVLFFRTPV SPINSLGTGV ALAGVFLYSQ LKRLKPKPKT A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle