Protein: | IPI:IPI00282448.... |
Organism: | Mus musculus |
Length: | 178 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IPI:IPI00282448.....
Description | E-value | Query Range |
Subject Range |
|
175.0 | [0..1] | [178..1] |
|
173.0 | [0..1] | [178..1] |
|
173.0 | [0..1] | [178..1] |
|
172.0 | [0..1] | [178..1] |
|
172.0 | [0..1] | [178..1] |
|
171.0 | [0..1] | [178..1] |
|
171.0 | [0..1] | [178..1] |
|
170.0 | [0..1] | [178..1] |
|
170.0 | [0..1] | [178..1] |
|
167.0 | [0..1] | [178..1] |
Region A: Residues: [1-70] |
1 11 21 31 41 51 | | | | | | 1 MLRDKFIHYF QQWRERQLSR GEHWLAQHLA GRSPREKGML LAAVVFLFSV GYYVLIWQPL 60 61 SERIEQQETI |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [71-178] |
1 11 21 31 41 51 | | | | | | 1 LQQLVAMNTR LKNAAPDIIA ARKSATTTPA QVSRVISDSA SAHSVVIRRI ADRGENIQVW 60 61 IEPVVFNDLL KWLNALDEKY ALRVTQIDVS AAEKPGMVNV QRLEFGRG |
Detection Method: | |
Confidence: | 20.0 |
Match: | 1uv7A |
Description: | periplasmic domain of EpsM from Vibrio cholerae |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
protein transporter activity | 1.78637125929635 | bayes_pls_golite062009 |
transporter activity | 1.0103803313803 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.56992532298404 | bayes_pls_golite062009 |