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View Structure Prediction Details

Protein: DLRB2_MOUSE
Organism: Mus musculus
Length: 96 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DLRB2_MOUSE.

Description E-value Query
Range
Subject
Range
gi|56203991, gi|... - gi|56204931|emb|CAI23309.1| dynein, light chain, roadblock-type 1 [Homo sapiens], gi|56203991|emb|CA...
172.0 [0..2] [96..54]
gi|109129304 - gi|109129304|ref|XP_001111256.1| PREDICTED: similar to dynein, cytoplasmic, light polypeptide 2B iso...
171.0 [0..2] [96..31]
gi|50753873 - gi|50753873|ref|XP_414162.1| PREDICTED: similar to dynein, cytoplasmic, light chain 2B; dynein, cyto...
169.0 [0..2] [96..67]
gi|57087115 - gi|57087115|ref|XP_536771.1| PREDICTED: similar to dynein, cytoplasmic, light chain 2B [Canis famili...
tr|G1SVF4|G1SVF4... - Uncharacterized protein OS=Oryctolagus cuniculus GN=DYNLRB2 PE=4 SV=2
DLRB2_BOVIN - Dynein light chain roadblock-type 2 OS=Bos taurus GN=DYNLRB2 PE=3 SV=1
166.0 [0..1] [96..1]
gi|126631441, gi... - gi|148223423|ref|NP_001091409.1| hypothetical protein LOC100049099 [Xenopus laevis], gi|126631441|gb...
gi|62858449, gi|... - gi|89273745|emb|CAJ81425.1| dynein, cytoplasmic, light polypeptide 2B [Xenopus tropicalis], gi|62858...
164.0 [0..1] [96..1]
gi|19262989, gi|... - gi|74096267|ref|NP_001027623.1| roadblock-related dynein light chain [Ciona intestinalis], gi|192629...
159.0 [0..1] [96..1]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVEETLKR IQSHKGVIGT MVVNAEGIPI RTTLDNSTTV QYAGLLHQLT MKAKSTVRDI  60
   61 DPQNDLTFLR IRSKKHEIMV APDKEYLLIV IQNPCE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.39794
Match: 2hz5A
Description: No description for 2hz5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle