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View Structure Prediction Details

Protein: SPRR3_MOUSE
Organism: Mus musculus
Length: 238 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPRR3_MOUSE.

Description E-value Query
Range
Subject
Range
gi|8163670 - gi|8163670|gb|AAF73793.1|AF154024_1 surface protein PspC [Streptococcus pneumoniae]
143.0 [0..3] [238..163]
gi|109498800 - gi|109498800|ref|XP_001070215.1| PREDICTED: similar to proteoglycan 4 [Rattus norvegicus]
139.0 [0..3] [220..381]
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
128.0 [0..6] [233..752]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSYQQKQPF VPPPQPEQHQ VKQPCQPPPQ GKFVPIATSE PCHTDVPQPG NTKIPEPCST  60
   61 KVPEPGNTVV LEPDYTTMPG PCSTNITEPD YTTIPGPCST NITEPDYTTI PGPCSTNIPG 120
  121 PDRTVVPGSC 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.968
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #2
Region A:
Residues: [131-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STNITEPDYT TIPGPSSTKI PDPGCAMVPG PSPSSTSEPS SEPCSINVRE PGYMNASEPT  60
   61 HAKVPDQGYT KIPDQGSSKV PEPCQSRVPE VCPPTVTPVS AKQKTKQK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.19
Match: 1q1qA
Description: Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle