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View Structure Prediction Details

Protein: MBL2_MOUSE
Organism: Mus musculus
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MBL2_MOUSE.

Description E-value Query
Range
Subject
Range
MBL2_RAT - Mannose-binding protein C OS=Rattus norvegicus GN=Mbl2 PE=1 SV=2
161.0 [0..1] [244..1]
gi|233018 - gi|233018|gb|AAB19343.1| mannose-binding protein C; MBP-C [Mus sp.]
158.0 [0..1] [244..1]
gi|73952318 - gi|73952318|ref|XP_546039.2| PREDICTED: similar to chondroitin sulfate proteoglycan 2 (versican) [Ca...
154.0 [0..45] [242..3552]
CSPG2_CHICK - Versican core protein OS=Gallus gallus GN=VCAN PE=2 SV=1
154.0 [0..46] [242..3253]
gi|109077850 - gi|109077850|ref|XP_001112269.1| PREDICTED: similar to chondroitin sulfate proteoglycan 2 (versican)...
152.0 [0..45] [242..3089]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFTSFLLL CVVTVVYAET LTEGVQNSCP VVTCSSPGLN GFPGKDGRDG AKGEKGEPGQ  60
   61 GLRGLQGPPG KVGPTGPPGN PGLKGAVGPK GDRGDRAEFD TSEIDSEIAA LRSE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.75
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [115-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRALRNWVLF SLSEKVGKKY FVSSVKKMSL DRVKALCSEF QGSVATPRNA EENSAIQKVA  60
   61 KDIAYLGITD VRVEGSFEDL TGNRVRYTNW NDGEPNNTGD GEDCVVILGN GKWNDVPCSD 120
  121 SFLAICEFSD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 1hupA
Description: HUMAN MANNOSE BINDING PROTEIN CARBOHYDRATE RECOGNITION DOMAIN TRIMERIZES THROUGH A TRIPLE ALPHA-HELICAL COILED-COIL
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle