YRC Public Data Repository - Protein Structure Prediction

Protein:	MGDP1_MOUSE
Organism:	Mus musculus
Length:	164 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGDP1_MOUSE.

Description	E-value	Query Range	Subject Range
MDP1 - magnesium-dependent phosphatase 1	144.0	[0..1]	[163..1]
gi\|73962658 - gi\|73962658\|ref\|XP_537388.2\| PREDICTED: similar to magnesium-dependent phosphatase-1 [Canis familiar...	143.0	[0..1]	[163..54]
gi\|149063990, gi... - gi\|27700106\|ref\|XP_214200.1\| PREDICTED: similar to magnesium-dependent phosphatase-1 [Rattus norvegi...	142.0	[0..1]	[164..1]
gi\|32034240 - gi\|32034240\|ref\|ZP_00134451.1\| COG0546: Predicted phosphatases [Actinobacillus pleuropneumoniae sero... gi\|126098145, gi... - gi\|126209353\|ref\|YP_001054578.1\| phosphoglycolate phosphatase [Actinobacillus pleuropneumoniae L20],...	124.0	[0..1]	[153..1]
gi\|116184715, gi... - gi\|75855428\|ref\|ZP_00763079.1\| COG0546: Predicted phosphatases [Vibrio sp. Ex25], gi\|116184715\|ref\|Z...	121.0	[0..1]	[153..1]
gi\|112822365, gi... - gi\|113460322\|ref\|YP_718383.1\| phosphoglycolate phosphatase [Haemophilus somnus 129PT], gi\|112822365\|...	119.0	[0..1]	[157..1]
gi\|170718574, gi... - gi\|53728307\|ref\|ZP_00348122.1\| COG0546: Predicted phosphatases [Haemophilus somnus 2336], gi\|1707185...	119.0	[0..1]	[157..1]
GPH_VIBPA - Phosphoglycolate phosphatase OS=Vibrio parahaemolyticus GN=gph PE=3 SV=1 GPH_VIBPA - Phosphoglycolate phosphatase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gph ...	119.0	[0..1]	[153..1]
gi\|27360851, gi\|... - gi\|27364706\|ref\|NP_760234.1\| phosphoglycolate phosphatase [Vibrio vulnificus CMCP6], gi\|27360851\|gb\|... GPH_VIBVU - (Q8DCT7) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)	118.0	[0..1]	[153..6]
GPH_VIBVY - (Q7MH14) Phosphoglycolate phosphatase (EC 3.1.3.18) (PGPase) (PGP)	118.0	[0..1]	[153..6]

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Predicted Domain #1

Region A:
Residues: [1-164]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLPKLAVF DLDYTLWPFW VDTHVDPPFH KSSDGTVRDR RGQNIQLYPE VPEVLGRLQS  60
   61 LGVPVAAASR TSEIQGANQL LELFDLGKYF IQREIYPGSK VTHFERLHHK TGVPFSQMVF 120
  121 FDDENRNIID VGRLGVTCIH IRDGMSLQTL TQGLETFAKA QAGL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.39794
Match:	1u7oA
Description:	Magnesium Dependent Phosphatase 1 (MDP-1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity	0.877696725573375	bayes_pls_golite062009
catalytic activity	0.786540433906087	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: