| Protein: | RYBP_MOUSE |
| Organism: | Mus musculus |
| Length: | 228 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RYBP_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
260.0 | [0..12] | [227..59] |
|
|
254.0 | [0..11] | [228..262] |
|
|
249.0 | [0..11] | [228..268] |
|
|
246.0 | [0..11] | [228..409] |
|
|
245.0 | [0..11] | [228..96] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MTMGDKKSPT RPKRQAKPAA DEGFWDCSVC TFRNSAEAFK CSICDVRKGT STRKPRINSQ 60
61 LVAQQVAQQY ATPPPPKKEK KEKVEKPDKE KPEKDKDISP SVTKKNTNKK TKPKSDILKD 120
121 PPSEAN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.275 | 0.165 | negative regulation of transcription from RNA polymerase II promoter | a.1.1 | Globin-like |
| View | Download | 0.332 | 0.039 | negative regulation of transcription from RNA polymerase II promoter | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.332 | 0.027 | zinc ion binding | c.55.4 | Translational machinery components |
| View | Download | 0.405 | 0.014 | negative regulation of transcription from RNA polymerase II promoter | d.110.2 | GAF domain-like |
| View | Download | 0.284 | 0.002 | negative regulation of transcription from RNA polymerase II promoter | b.1.12 | Purple acid phosphatase, N-terminal domain |
|
Region A: Residues: [127-228] |
1 11 21 31 41 51
| | | | | |
1 SIQSANATTK TSETNHTSRP RLKNVDRSTA QQLAVTVGNV TVIITDFKEK TRSSSTSSST 60
61 VTSSAGSEQQ NQSSSGSEST DKGSSRSSTP KGDMSAVNDE SF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
