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View Structure Prediction Details

Protein: TIM22_MOUSE
Organism: Mus musculus
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM22_MOUSE.

Description E-value Query
Range
Subject
Range
gi|6760457 - gi|6760457|gb|AAF28360.1|AF223951_1 TIM22 preprotein translocase [Rattus norvegicus]
208.0 [0..5] [194..1]
TIMM22 - translocase of inner mitochondrial membrane 22 homolog (yeast)
198.0 [0..1] [194..1]
gi|57091309 - gi|57091309|ref|XP_537758.1| PREDICTED: similar to Mitochondrial import inner membrane translocase s...
198.0 [0..3] [194..2]
gi|18490564 - gi|18490564|gb|AAH22610.1| Timm22 protein [Mus musculus]
197.0 [0..2] [194..1]
gi|114665566 - gi|114665566|ref|XP_001153337.1| PREDICTED: hypothetical protein [Pan troglodytes]
196.0 [0..1] [194..1]
TIM22_XENTR - Mitochondrial import inner membrane translocase subunit Tim22 OS=Xenopus tropicalis GN=timm22 PE=2 S...
190.0 [0..9] [194..2]
TIM22_XENLA - Mitochondrial import inner membrane translocase subunit Tim22 OS=Xenopus laevis GN=timm22 PE=2 SV=1
188.0 [0..23] [194..13]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAPKAGG SAPEAAGSAE APLQYSLLLQ YLVGDKRQPR LLEPGSLGGI PSPAKSEEQK  60
   61 MIERAMESCA FKAVLACVGG FVLGGAFGIF TAGIDTNVGF DPKDPYRTPT AKEVLKDMGQ 120
  121 RGMSYAKNFA IVGAMFSCTE CLVESYRGKS DWKNSVISGC ITGGAIGFRA GVKAGAIGCG 180
  181 GFAAFSAAID YYLR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 37.017729
Match: PF02466.10
Description: No description for PF02466.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle