| Protein: | SNF5_MOUSE |
| Organism: | Mus musculus |
| Length: | 385 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNF5_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
699.0 | [0..1] | [385..1] |
|
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698.0 | [0..1] | [385..1] |
|
|
698.0 | [0..1] | [385..1] |
|
|
693.0 | [0..1] | [385..1] |
|
|
679.0 | [0..2] | [385..1] |
|
|
678.0 | [0..1] | [385..1] |
|
|
678.0 | [0..2] | [385..1] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MMMMALSKTF GQKPVKFQLE DDGEFYMIGS EVGNYLRMFR GSLYKRYPSL WRRLATVEER 60
61 KKIVASSHGK KTKPNTKDHG YTTLATSVTL LKASEVEEIL DGNDEKYKAV SISTEPPTYL 120
121 REQKAK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.518 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.499 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.469 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.465 | N/A | N/A | a.141.1 | Frizzled cystein-rich domain |
| View | Download | 0.452 | N/A | N/A | f.27.1 | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.446 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.342 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.333 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.315 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.311 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
|
Region A: Residues: [127-258] |
1 11 21 31 41 51
| | | | | |
1 RNSQWVPTLP NSSHHLDAVP CSTTINRNRM GRDKKRTFPL CFDDHDPAVI HENASQPEVL 60
61 VPIRLDMEID GQKLRDAFTW NMNEKLMTPE MFSEILCDDL DLNPLTFVPA IASAIRQQIE 120
121 SYPTDSILED QS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.714 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.714 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.667 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.655 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.649 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.635 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.622 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.614 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.591 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.574 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
|
Region A: Residues: [259-385] |
1 11 21 31 41 51
| | | | | |
1 DQRVIIKLNI HVGNISLVDQ FEWDMSEKEN SPEKFALKLC SELGLGGEFV TTIAYSIRGQ 60
61 LSWHQKTYAF SENPLPTVEI AIRNTGDADQ WCPLLETLTD AEMEKKIRDQ DRNTRRMRRL 120
121 ANTAPAW
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
