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View Structure Prediction Details

Protein: MTC1_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTC1_SCHPO.

Description E-value Query
Range
Subject
Range
gi|37532658, gi|... - gi|37532658|ref|NP_920631.1| hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|31431...
353.0 [0..15] [347..508]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETKEQTDD VETLMASLDQ LGMEADPTSK EFNNDDSKIG APSEVQDEKE LLEFLDQLEN  60
   61 DEEKNEKNPI EEANEENESV AATSNERQQH DASNQPSQAA QTTINKNTES ATPKTVNEIN 120
  121 KSQEFQEHVE TPKQSNWLGG FWSTASAAVR SAEQRVRSIK GFEENANWDI NVRNMV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLNKLGDLSN GIRSKALPTL SNTIHNVLNV VAPPIHDHEV LQVTVFHDLA GFAHLDRIVY  60
   61 ESFEKVMFQV EGGELTVLLD KEAKVRPRTN DVYEDFGLCN GYLEAKKLAK ANLAEPITEA 120
  121 KKMNKENKQE NVGAGDDEDA SESPMVRVTH LLLVIQAFTI KNKEVSDDEQ L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [348-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CFLIHLNDTN HNLEFSTTSQ PLPLEWQRWA VDPRYIKLFG SNAILPNEWV TEWVEQSISV  60
   61 AAGIVAQMYT SKRMALGDPS LFAGLPEEDV NTGSSETPVP YYDGAMYA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle