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View Structure Prediction Details

Protein: YE35_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 568 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YE35_SCHPO.

Description E-value Query
Range
Subject
Range
gi|38105097, gi|... - gi|39942158|ref|XP_360616.1| hypothetical protein MG03159.4 [Magnaporthe grisea 70-15], gb|EAA51564....
654.0 [0..5] [568..29]
gi|115385943, gi... - gi|115385943|ref|XP_001209518.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
649.0 [0..5] [568..14]
gi|42551231, gi|... - gi|46121637|ref|XP_385373.1| hypothetical protein FG05197.1 [Gibberella zeae PH-1], gi|42551231|gb|E...
644.0 [0..5] [568..23]
gi|85083763 - gi|85083763|ref|XP_957181.1| hypothetical protein ( hypothetical protein B17C10.170 [imported] - Neu...
gi|32415435, gi|... - gi|32415435|ref|XP_328197.1| hypothetical protein ( hypothetical protein B17C10.170 [imported] - Neu...
633.0 [0..5] [568..59]
gi|16416091 - gi|16416091|emb|CAB91237.2| conserved hypothetical protein [Neurospora crassa]
gi|164428165, gi... - gi|164428165|ref|XP_957181.2| hypothetical protein NCU01758 [Neurospora crassa OR74A], gi|157072037|...
633.0 [0..5] [568..22]
gi|13430492 - gi|13430492|gb|AAK25868.1|AF360158_1 unknown protein [Arabidopsis thaliana]
628.0 [0..1] [568..40]
gi|24986851, gi|... - gi|26991744|ref|NP_747169.1| hypothetical protein PP_5068 [Pseudomonas putida KT2440], gi|24986851|g...
627.0 [0..1] [568..25]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKLKDLPV SSTFTSNLPP DPLVPTVQAM KKADDRILHV PRFVEGGGLF TYLTPSLKAN  60
   61 SQLLAYSPSS VKSLGLEESE TQTEAFQQLV VGSNVDVNKC CPWAQCYGGY QFGDWAGQLG 120
  121 DGRVVSLCEL TNPETGKRFE IQVKGAGRTP YSRFADGKAV LRSSIREYLC CEALYALGIP 180
  181 TT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QALAISNLEG VVAQRETVEP CAVVCRMAPS WIRIGTFDLQ GINNQIESLR KLADYCLNFV  60
   61 LKDGFHGGDT GNRYEKLLRD VAYRNAKTVA KWQAYGFMNG VLNTDNTSIL GLSIDYGPFG 120
  121 FLDVYN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSFTPNHDDV FLRYSYRNQP DIIIWNLSKL ASALVELIGA CDKVDDLQYM EQLHNSTDLL  60
   61 KKAFAYTSEV FEKIVEEYKN IVQNDFYDLM FKRVGLPSDS SNKILITDLL QILEDYELDM 120
  121 PNCFSFLSRN SPSSMENEEY AAKLMQACIC LNPNNERVRN ESVKAFTNWV GRYSEATK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [487-568]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQEDSSRLAS MKKVNPHFTL RNWVLEEVIK EAYIGKFELF KKVCKMAACP FEDTWGFSKE  60
   61 EEDYLCYNTT PSKSQIQCSC SS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle