Protein: | MED17_SCHPO |
Organism: | Schizosaccharomyces pombe 972h- |
Length: | 545 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED17_SCHPO.
Description | E-value | Query Range |
Subject Range |
|
461.0 | [0..1] | [367..7] |
|
430.0 | [0..10] | [431..1] |
|
423.0 | [0..14] | [356..20] |
|
388.0 | [0..34] | [366..82] |
|
388.0 | [0..13] | [361..7] |
|
354.0 | [0..34] | [362..99] |
|
328.0 | [0..12] | [446..4] |
|
327.0 | [0..10] | [431..1] |
|
325.0 | [0..15] | [436..5] |
Region A: Residues: [1-289] |
1 11 21 31 41 51 | | | | | | 1 MAEEANKDAD ISSLSLSLDP EIIGGQNNFL ENNLQQIFQK IIQERGPFRD LKEEDLQKEL 60 61 QKESIKDESS AKSSETENVL EFATLDSKRN VNDTEVESMD SQAYKKELIE QIMIAQTECS 120 121 LALDMTSLLL SKFKENSIET ISPFLKSTVP PSSLQFSRSQ PPESKESDAT LAKCWKEKSL 180 181 TSSCKFLFEA KERLTSVVET EHEYYTELVK VKEASWPLFN SQGSNHLSVQ YSCLGGISLG 240 241 LGLIRMKPES KSFEVQSSLL YSQAALKISI LNKDRDEIGS STWSWPSQN |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [290-368] |
1 11 21 31 41 51 | | | | | | 1 CNSVLLKDIY KLQEILFEMD IWNSLLQEAQ SCGNQGVNFT GDEILVPISD DHVVRITLET 60 61 SSKNTESGFT EDKKSNEDT |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.365 | 0.826 | regulation of transcription, DNA-dependent | a.4.5 | "Winged helix" DNA-binding domain |
Region A: Residues: [369-545] |
1 11 21 31 41 51 | | | | | | 1 STNFVTIKQE KELLKCLCDT LNAIAHILFL KHCRKSDRRS QQPELYMAID ANAPLILRPL 60 61 IFYYNLNQES LEFQRWLKQR DISFKFMPNY PWEKAKDFLE LENSLSINRL SISWRIMVSN 120 121 FEPAIFIQHT PTLHGTDKSV WRCKDQYSSN QFSSLKNVCQ YIEHHINSLS RRSKKTE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.