YRC Public Data Repository - Protein Structure Prediction

Protein:	MAE1_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	438 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAE1_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|85090331 - gi\|85090331\|ref\|XP_958365.1\| hypothetical protein [Neurospora crassa OR74A] gi\|28919722, gi\|... - gi\|32414647\|ref\|XP_327803.1\| hypothetical protein [Neurospora crassa], gi\|28919722\|gb\|EAA29129.1\| hy...	361.0	[0..8]	[391..164]
gi\|88184268, gi\|... - gi\|88184268\|gb\|EAQ91736.1\| hypothetical protein CHGG_03671 [Chaetomium globosum CBS 148.51], gi\|1162...	347.0	[0..21]	[391..1573]
gi\|39968603, gi\|... - gi\|39968603\|ref\|XP_365692.1\| hypothetical protein MGG_02394 [Magnaporthe grisea 70-15], gb\|EAA54409....	346.0	[0..3]	[389..248]
gi\|46115602, gi\|... - gi\|46115602\|ref\|XP_383819.1\| hypothetical protein FG03643.1 [Gibberella zeae PH-1], gi\|42550364\|gb\|E...	335.0	[0..16]	[391..68]
MAE2_SCHPO - Putative malic acid transport protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC... SPCC794.06 - TDT malic acid transporter	324.0	[0..6]	[389..2]
gi\|70983484, gi\|... - gi\|70983484\|ref\|XP_747269.1\| C4-dicarboxylate transporter/malic acid transport protein, putative [As... gi\|159123725 - gi\|159123725\|gb\|EDP48844.1\| C4-dicarboxylate transporter/malic acid transport protein, putative [Asp...	319.0	[0..21]	[390..26]

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Predicted Domain #1

Region A:
Residues: [1-177]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELKEILKQ RYHELLDWNV KAPHVPLSQR LKHFTWSWFA CTMATGGVGL IIGSFPFRFY  60
   61 GLNTIGKIVY ILQIFLFSLF GSCMLFRFIK YPSTIKDSWN HHLEKLFIAT CLLSISTFID 120
  121 MLAIYAYPDT GEWMVWVIRI LYYIYVAVSF IYCVMAFFTI FNNHVYTIET ASPAWIL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [178-438]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIFPPMICGV IAGAVNSTQP AHQLKNMVIF GILFQGLGFW VYLLLFAVNV LRFFTVGLAK  60
   61 PQDRPGMFMF VGPPAFSGLA LINIARGAMG SRPYIFVGAN SSEYLGFVST FMAIFIWGLA 120
  121 AWCYCLAMVS FLAGFFTRAP LKFACGWFAF IFPNVGFVNC TIEIGKMIDS KAFQMFGHII 180
  181 GVILCIQWIL LMYLMVRAFL VNDLCYPGKD EDAHPPPKPN TGVLNPTFPP EKAPASLEKV 240
  241 DTHVTSTGGE SDPPSSEHES V

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits