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View Structure Prediction Details

Protein: VDAC3_MOUSE
Organism: Mus musculus
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VDAC3_MOUSE.

Description E-value Query
Range
Subject
Range
gi|114619980 - gi|114619980|ref|XP_001138480.1| PREDICTED: similar to voltage dependent anion channel form 3 [Pan t...
374.0 [0..1] [283..288]
ENSPTRT00000004999 - null
gi|55664663, gi|... - gi|57209203|emb|CAI40914.1| voltage-dependent anion channel 2 [Homo sapiens], gi|55664663|emb|CAH731...
362.0 [0..1] [283..27]
VDAC2_MOUSE - Voltage-dependent anion-selective channel protein 2 OS=Mus musculus GN=Vdac2 PE=1 SV=2
gi|53733651 - gb|AAH83965.1| Unknown (protein for MGC:98006) [Xenopus laevis]
361.0 [0..1] [283..13]
gi|73953097, gi|... - gi|73953097|ref|XP_536398.2| PREDICTED: similar to voltage-dependent anion channel 2 isoform 1 [Cani...
360.0 [0..1] [283..12]
VDAC2_PIG - Voltage-dependent anion-selective channel protein 2 OS=Sus scrofa GN=VDAC2 PE=2 SV=1
360.0 [0..1] [283..12]
VDAC2_RABIT - Voltage-dependent anion-selective channel protein 2 OS=Oryctolagus cuniculus GN=VDAC2 PE=2 SV=1
POR2_BOVIN - (P68002) Voltage-dependent anion-selective channel protein 2 (Outer mitochondrial membrane protein p...
359.0 [0..1] [283..12]
VDAC2_BOVIN - Voltage-dependent anion-selective channel protein 2 OS=Bos taurus GN=VDAC2 PE=2 SV=2
359.0 [0..1] [283..12]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCNTPTYCDL GKAAKDVFNK GYGFGMVKID LKTKSCSGVE FSTSGHAYTD TGKASGNLET  60
   61 KYKVCNYGLT FTQKWNTDNT LGTEISWENK LAEGLKLTLD TIFVPNTGKK SGKLKASYRR 120
  121 DCFSLGSNVD IDFSG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 8.431798
Match: PF01459.13
Description: No description for PF01459.13 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.800 0.893 learning d.93.1 SH2 domain
View Download 0.756 0.031 learning b.1.18 E set domains
View Download 0.803 0.002 learning b.61.1 Avidin/streptavidin
View Download 0.762 N/A N/A d.93.1 SH2 domain
View Download 0.729 N/A N/A d.93.1 SH2 domain

Predicted Domain #2
Region A:
Residues: [136-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTIYGWAVLA FEGWLAGYQM SFDTAKSKLS QNNFALGYKA ADFQLHTHVN DGTEFGGSIY  60
   61 QKVNERIETS INLAWTAGSN NTRFGIAAKY KLDCRTSLSA KVNNASLIGL GYTQTLRPGV 120
  121 KLTLSALIDG KNFNAGGHKV GLGFELEA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 2ervA
Description: No description for 2ervA was found.

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