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View Structure Prediction Details

Protein: KLF13_MOUSE
Organism: Mus musculus
Length: 289 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KLF13_MOUSE.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
347.0 [0..2] [288..2541]
gi|114626840 - gi|114626840|ref|XP_528435.2| PREDICTED: zinc finger protein 79 (pT7) [Pan troglodytes]
311.0 [0..1] [288..380]
gi|76644053 - gi|76644053|ref|XP_592867.2| PREDICTED: similar to zinc finger protein 287 [Bos taurus]
311.0 [0..2] [288..714]
gi|109113439, gi... - gi|109113439|ref|XP_001087082.1| PREDICTED: similar to zinc finger protein 287 isoform 3 [Macaca mul...
296.0 [0..3] [288..411]
ZNF287 - zinc finger protein 287
295.0 [0..3] [288..411]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAYVDHF AAECLVSMSS RAVVHEPREG PEPRPEGAAA AAPTLPRVDE RRDGKDSASL  60
   61 FVVARILADL NQQAPAPAPA ERREGAAARK ARTPCRLPPA PPAPPPGPEP ASPGQAGAPA 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.045757
Match: 1meyC
Description: Designed zinc finger protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [121-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APPSPAWSEP EAALEQEPGP AGSGEPGLRQ RGRRGRSRAD LESPQRKHKC HYAGCEKVYG  60
   61 KSSHLKAHLR THTGERPFAC SWQECNKKFA RSDELARHYR THTGEKKFSC PICEKRFMRS 120
  121 DHLTKHARRH ANFHPGMLQR RGGGSRTGSL SDYSRSDASS PTISPASSP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.045757
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle