YRC Public Data Repository - Protein Structure Prediction

Protein:	FGF21_MOUSE
Organism:	Mus musculus
Length:	210 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FGF21_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|51949976, gi\|... - gi\|56118518\|ref\|NP_001008163.1\| fibroblast growth factor 8 (androgen-induced) [Xenopus (Silurana) tr...	218.0	[0..1]	[207..1]
gi\|213624952, gi... - gi\|27462802\|gb\|AAO15593.1\|AF461177_1 fibroblast growth factor-8b [Xenopus laevis], gi\|213626476\|gb\|A...	218.0	[0..1]	[207..1]
FGF8_CHICK - Fibroblast growth factor 8 OS=Gallus gallus GN=FGF8 PE=2 SV=1	218.0	[0..1]	[207..1]
gi\|18389439, gi\|... - gi\|18543365\|ref\|NP_570108.1\| fibroblast growth factor 21 [Rattus norvegicus], gi\|18389439\|dbj\|BAB842...	211.0	[0..1]	[210..1]
gi\|12024873 - gi\|12024873\|gb\|AAG45674.1\|AF190448_1 fibroblast growth factor 8 [Ambystoma mexicanum]	210.0	[0..6]	[205..7]

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Predicted Domain #1

Region A:
Residues: [1-210]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWMRSRVGT LGLWVRLLLA VFLLGVYQAY PIPDSSPLLQ FGGQVRQRYL YTDDDQDTEA  60
   61 HLEIREDGTV VGAAHRSPES LLELKALKPG VIQILGVKAS RFLCQQPDGA LYGSPHFDPE 120
  121 ACSFRELLLE DGYNVYQSEA HGLPLRLPQK DSPNQDATSW GPVRFLPMPG LLHEPQDQAG 180
  181 FLPPEPPDVG SSDPLSMVEP LQGRSPSYAS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.30103
Match:	2p23A
Description:	No description for 2p23A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits