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View Structure Prediction Details

Protein: SPR2E_MOUSE
Organism: Mus musculus
Length: 76 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPR2E_MOUSE.

Description E-value Query
Range
Subject
Range
gi|28379477, gi|... - gi|28379477|ref|NP_786369.1| cell surface protein precursor [Lactobacillus plantarum WCFS1], gi|2827...
118.0 [0..4] [74..1174]
gi|25388168 - pir||F95013 pneumococcal surface protein A [imported] - Streptococcus pneumoniae (strain TIGR4)
gi|14971584, gi|... - gi|15900059|ref|NP_344663.1| pneumococcal surface protein A [Streptococcus pneumoniae TIGR4], gi|149...
98.0 [0..10] [76..465]
gi|116095803, gi... - gi|116630221|ref|YP_815393.1| hypothetical protein LGAS_1663 [Lactobacillus gasseri ATCC 33323], gi|...
97.0 [0..4] [76..2238]
TTN - titin
88.0 [0..4] [76..10217]
gi|94481968 - gi|94481968|gb|ABF21668.1| unknown [Human herpesvirus 3]
86.0 [0..13] [75..2475]
gi|42519684, gi|... - gi|42519684|ref|NP_965614.1| hypothetical protein LJ0641 [Lactobacillus johnsonii NCC 533], gi|41583...
80.0 [0..4] [75..1228]
NFM_CHICK - Neurofilament medium polypeptide OS=Gallus gallus GN=NEFM PE=2 SV=2
76.0 [0..4] [76..637]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYQQQQCKQ PCQPPPVCPP KKCPEPCPHP QCPEPCPPPK CPEPCPEPCP PPSYQQKCPP  60
   61 VQPPPPCQQK CPPKSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.385 a.4.5 "Winged helix" DNA-binding domain
View Download 0.359 d.88.1 SRF-like
View Download 0.275 d.82.1 Copper amine oxidase, domain N
View Download 0.270 a.60.15 Description not found.
View Download 0.260 a.22.1 Histone-fold
View Download 0.243 d.58.1 4Fe-4S ferredoxins
View Download 0.230 g.18.1 Complement control module/SCR domain
View Download 0.217 a.4.5 "Winged helix" DNA-binding domain


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