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View Structure Prediction Details

Protein: FBpp0306724, CG7...
Organism: Drosophila melanogaster
Length: 1489 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306724, CG7....

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
642.0 [0..391] [1456..1621]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVNWMDDDE DLVAALAMHE EQKSEDADGT RWEHCDEACD GFDMATGHNW IYPNNLPLRS  60
   61 YQQTIVQSAL F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.0
Match: 2ipcA
Description: No description for 2ipcA was found.

Predicted Domain #2
Region A:
Residues: [72-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNTLVVLPTG LGKTFIAAVV MYNFYRWYPK GKIVFMAPTR PLVSQQIHAS QKIMPFPSED  60
   61 TVQLTGQLPR PKRAELWASK RVFFATPQVV HSDMLEADGE CSFPFGSIKL IVVDEAHRAK 120
  121 GRYAYTQVAD CLMARNRYFR MLALSATPGR TMEDVAAVCR NLYISNLQVR WDTSIDVQPY 180
  181 IHRRTIRTIV VSLKERIKEP RERLLQIIEP YLRQLMEAEI FKGNKGTVSR NSLLFEQKSF 240
  241 VERSAQGQRH PDHNIIMGNF AMCISMYHSL DLMERHGLRV FVNNFDADDD GREKFVLARD 300
  301 GNLRNLVEQV RQELGANPLD YTTHAMTNGE VPPLPSDLDF GHAKYEKLRQ VLVQHFQANP 360
  361 DSRAIVFCEY RESVMLIHRL LLQHRPVLRP RCFVGQGSTV GASYALTQKQ QLQIMTDFRS 420
  421 GTSNVLVATS IGEEGLDVGE VEMIVCFDIC STNPTRFIQR IGRTGRKKNG EVVMLVTEGR 480
  481 EQQVLKDVLA NKDQINKKLL NSSVVKLSLY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.522879
Match: 1wp9A
Description: Crystal structure of Pyrococcus furiosus Hef helicase domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [582-668]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EQNPRMVPSK FQPKCEEKHM EPVAEEKPKP KSAAKTKESR KRKQPVAQTG SLRKYFKESP  60
   61 PTESQQGILQ GIKPYQMSEA SQQLVKQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [669-809]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVLRRSVTLK NFFGESQASS TLTSSQEDVQ RLRKLTRLLQ SSKPFVSDSK DLMSHLQDDH  60
   61 LPRQIKLYLL KSNPEFLRET HLKMQVQSEL NIADDRLNSR QRRTKNNYQL LLDICDGMDQ 120
  121 MNELLQGDNS GAEISFRDEL N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.154902
Match: 2datA
Description: No description for 2datA was found.

Predicted Domain #5
Region A:
Residues: [810-877]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIYNQSPKKF DTICEQIFDG LNEHGLNSNN FELKQDLLEK LELRNLETTV NEQLGGIEAS  60
   61 WSEEEWDQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [878-1038]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEEDVKFESM YLSQQLNLPD ANVVPHSSTP LRVKPLSKLM FKTLQGDIEE EYHSGMEASE  60
   61 LGDNLGRLNS LMNASESKIK ATERIAPIPV VDSTIETNHF PAVEESQRST PISIADSSGE 120
  121 SNHCAVNKNS EIYPMSIDET KVEVKSSLNL KMHAESIVED L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.30103
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #7
Region A:
Residues: [1039-1369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIDLDDFLEP MDKELELASQ TKGKSQENIV DHQMEKLEKN CEQKETAHNN DLDLTDEDLK  60
   61 EFLEPMVEEV ELMSQKKAND FKDFLEPMPE ELELMSQQKK NILLPSTETI KNSENKNSHE 120
  121 DGSRTVSPDI FGSDSMSPLK PQGKSLAAKL AAKAAAKVLP CPPPNSVGLN SPENRKRTNP 180
  181 SIQEKSPSIF DLYLNRMRGR GRLAKAAENL HRITSTNPTI SVPKDEEDSP IARRPSKRKI 240
  241 VISSDEEEEQ KPQIAETQVD CESDDYERIL DTQMPDPRKT PTRPRHKRSK FNSFILDEAE 300
  301 KSGSDHEEEG ETTIGTYLKD SMIVSSDDED H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #8
Region A:
Residues: [1370-1489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDTNTHAIYL RALKSPIQRP GAFKMPPPRV FRDESHIFSQ PVEDDSSQYM QCSFIVDDES  60
   61 STIERGHDVS ECPLEKAERI LKERRKQRRL GKVPSAPVNK RRRLQTISTS SDEDDVVLID 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle