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View Structure Prediction Details

Protein: l(3)82Fd-PP
Organism: Drosophila melanogaster
Length: 1314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for l(3)82Fd-PP.

Description E-value Query
Range
Subject
Range
l(3)82Fd-PN, l(3... - The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It i...
570.0 [0..1] [1314..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIIDSGKYR LRKDWASASI PSLVNIDEHD GDSGDTEGSL NATAPLPPQK PPRRSSLALG  60
   61 LFSSKSDKSQ KRRSSIAVSF LRRDSSKNST KDSYESAVRS EKSDGSGTPT SPEIVYSSEE 120
  121 NIRASSPNDP GKQTFFEDGS QSPRPVLQGL NTSYEG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [157-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQNDRQRRRR SSLQTKLDRH RRKKMEYSNQ RSLDSGMMCS ESHSDLTNDS LAEGSGSFAN  60
   61 RSRNGNDDED DIIDPSHGEY FPREKRHSWW NIFVPDNFKN RSRRASQDVS SLSRSVDNLA 120
  121 IPVRRSKSRS VDHGLAAPFD LDSLRSKVEQ RFESVD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [313-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLSRQKSSLP TIPTISYTVG NRDTLTSVAA RFDTTPSELT HLNRLNSSFI YPGQQLLVPD  60
   61 KSAKDDASSS STHD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.16
Match: 2djpA
Description: No description for 2djpA was found.

Predicted Domain #4
Region A:
Residues: [387-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADGASLSGKS SPVERKLSGD ESREKDILEG LRPGSPKPGH IERVGGSSQQ QQAEEEANKS  60
   61 DDPVITQRFL KINVRHITDG QGVVGGVLLV TPNAVMFDPN VSDPLVIEHG PESYGVIAPM 120
  121 ELVVNAAIFH DIAHMRVAGG AGQGLNSASG DAEKPEIYYP KPVLVEEDSK ELPEQQSLLG 180
  181 EDGNKRLDAE IGSLEIADDQ ESLCSSTGRD GDAFPKAFDR ERVEDSSMEA KD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [619-689]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAKTDALDDE DKKAGLGLSS TRSTLEERRK SLLDHHWAIP SKDRSSEDEG DNESNVTVDS  60
   61 GARVQDPHSA N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [690-899]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSVSGVPLSQ PPVAAAAAAA AVAPASAVVP LPPSGIDLEH LEQLSKQSCY DSGIDIREPV  60
   61 PNVQPIPKKT VYSDADIVLS SDWVPPKTIV PTHFSESPPR STILGQSLDA GTGGAGGVRK 120
  121 KTSSVSFSVD DEAAQQAQAQ SAALAVTDKQ ADKKNKMLKR LSYPLTWVEG LTGEGGAVPP 180
  181 GGVGSGSLNK SGDTDSAPNT GDSNQSVFSK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [900-1099]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VFSSSPITLV SELGGNLFSK TPSEDSGGSP VPPLTPHSTH SEGHMTYGRS SIGTFIRPHS  60
   61 SEGTSSSTKL KEAKQAPKLD YRSMVSMDDK PELFISVDKL IPRPARACLD PPLYLRLRMG 120
  121 KPIGKAIPLP TSVMSYGKNK LRAEYWFSVP KNRVDELYRF INTWVKHLYG ELDEEQIKAR 180
  181 GFELIQEDTE WTKSGTTKAG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1100-1314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGSQDGEE ISDLTRESWE VLSMSTDEYR KTSLFATGSF DLDFPIPDLI GKTEILTEEH  60
   61 REKLCSHLPA RAEGYSWSLI FSTSQHGFAL NSLYRKMARL ESPVLIVIED TEHNVFGALT 120
  121 SCSLHVSDHF YGTGESLLYK FNPSFKVFHW TGENMYFIKG NMESLSIGAG DGRFGLWLDG 180
  181 DLNQGRSQQC STYGNEPLAP QEDFVIKTLE CWAFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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