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View Structure Prediction Details

Protein: gi|113194579, gi...
Organism: Drosophila melanogaster
Length: 884 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113194579, gi....

Description E-value Query
Range
Subject
Range
gi|91076912 - gi|91076912|ref|XP_975074.1| PREDICTED: similar to lethal (2) 01289 CG9432-PB [Tribolium castaneum]
448.0 [0..47] [884..781]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFTRLKTLS LLVCALLALS FPGHVSGAGN NNNKKGSQPV APPEPEAVIE EVNAKQLEKL  60
   61 LADKDYVAVF WYARSCVTCD KVLAELEKID DDTDSFGVDF VKINDKRLAK QYGIKNFPAL 120
  121 TYFREKEPII YDGDLMDEEG VLDFLTSLEA MDLPDRIEEV NAKILQKIIE DTDFVAVLFC 180
  181 NIASNQDVFN WILEQKADQS IQLINRDQLF EYIGTKDFLA VVFYKEDDPD SPRVLRHIEL 240
  241 IDDEAAEYGI YIVKMHDKLM AKKYGFRNPP GLTYFRKGKY INY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.221849
Match: 1a8yA
Description: CRYSTAL STRUCTURE OF CALSEQUESTRIN FROM RABBIT SKELETAL MUSCLE SARCOPLASMIC RETICULUM AT 2.4 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [284-737]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGDIDDEEEV LDWLTSPANM EMTDHIEQVN RKMFEKIRKN SDYVAVIFYS DECKQCPRVL  60
   61 AEVEHIDDEA DKAGIDFVKI DDKQMAKEYG VFALPAIVFF KPTSKEPVIY AGDLYEEEQI 120
  121 LTWLITQKDP SGDVIEDLEG ERLVHLIEES GSIAVYFYAD GCEQCTKVLE ELENIDDDCD 180
  181 KHGITFVKTR DFSVADGYGV HEYPALVYFE GGIPNVFEGE LSEEEEVLQW LITQKTEDRI 240
  241 ELITRQMLET MVEETQYLAV YFYKINCNIC DQILEGLELI DDECDVFGIH MVKIQDPQLA 300
  301 KRYSIKTFPA LVYFRNGNPL LFEGDLQNEQ SVLEWLIDDD NRELADEIEE VNERMLDRLM 360
  361 AESTLLVVFF YDDDCAECEE ILEELEEIDG EADMFGIDFV KIASIQAAKK YEIVNIPSLV 420
  421 YFRKQVPVLY DGDLHQHDKV ITWLTSQDVF EIKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.0
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [738-884]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIEEVNRKML DKLLEENEFL AVFFYEHNQP DSTAALEKLE NIDSETDNLD ITFVKMADSR  60
   61 YAKKWGVTKL PAMVYFRRRF PSIYRGDLLS EDEVLEWLRK NRFRQPELNI FMYALIALAV 120
  121 AFVVYTAFLL QCFKPAPPPP VQHPKQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.30103
Match: 2dj3A
Description: No description for 2dj3A was found.

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