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View Structure Prediction Details

Protein: d4-PB
Organism: Drosophila melanogaster
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for d4-PB.

Description E-value Query
Range
Subject
Range
d4-PC - The gene d4 is referred to in FlyBase by the symbol Dmel\d4 (CG2682, FBgn0033015). It is a protein_c...
211.0 [0..1] [339..159]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASGDNDSK DSHANVEKEW FHDEMDTSHF HHGDEFEDDF DSDNDFDESY TSRGKRKKCS  60
   61 RPRRTNANVE GTPKRGRKGG GNRRKNAVEG ESDRKRRAGG NSANTSAAAA AAAAAVAHAA 120
  121 CTAAAVASTG LYASHSNSAS PIPINDDNSQ SGLILPTNIS SSYDKTSSDA GASNDSIPLA 180
  181 TM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAINAGLTTS NVCNAHPVQT GTNQTVFATG NKVKQRVERD IAQPSPYCDF CLGDQRENKK  60
   61 TNMPEELVSC SDCGRSGHPS CLQFTANMII SVKRYRWQCI ECKYCSICGT SDNDDQLLFC 120
  121 DDCDRGYHMY CLSPPLVTPP EGSWSCKLCM EEFHKIK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.522879
Match: 2ysmA
Description: No description for 2ysmA was found.

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