| Protein: | p120ctn-PB |
| Organism: | Drosophila melanogaster |
| Length: | 767 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for p120ctn-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..1] | [767..15] |
|
Region A: Residues: [1-198] |
1 11 21 31 41 51
| | | | | |
1 MNSTHINMDL SLTHEPANMQ SQFGSFQNYD QFSAAGYSST PLYITKPTGV GAITKVAPHC 60
61 SQNKIETNST DNSIPDIENH PLATTVRYVQ AGQYEDTSEY GVAGLTCGID SEYTAEAVVP 120
121 YCYTSDANYT GIQNTTSSIK PFSGRPFNDN INGAEAVADS QCRTFKSSAE FKLPQFAMSS 180
181 INTVPQRLEE KDDYIEGS
|
| Detection Method: |  |
| Confidence: | 40.0 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [199-703] |
1 11 21 31 41 51
| | | | | |
1 ENDICSTMRW RDPNLSEVIS FLSNPSSAIK ANAAAYLQHL CYMDDPNKQR TRSLGGIPPL 60
61 VRLLSYDSPE IHKNACGALR NLSYGRQNDE NKRGIKNAGG IAALVHLLCR SQETEVKELV 120
121 TGVLWNMSSC EDLKRSIIDE ALVAVVCSVI KPHSGWDAVC CGETCFSTVF RNASGVLRNV 180
181 SSAGEHARGC LRNCEHLVEC LLYVVRTSIE KNNIGNKTVE NCVCILRNLS YRCQEVDDPN 240
241 YDKHPFITPE RVIPSSSKGE NLGCFGTNKK KKEANNSDAL NEYNISADYS KSSVTYNKLN 300
301 KGYEQLWQPE VVQYYLSLLQ SCSNPETLEA AAGAIQNLSA CYWQPSIDIR ATVRKEKGLP 360
361 ILVELLRMEV DRVVCAVATA LRNLAIDQRN KELIGKYAMR DLVQKLPSGN VQHDQNTSDD 420
421 TITAVLATIN EVIKKNPEFS RSLLDSGGID RLMNITKRKE KYTSCVLKFA SQVLYTMWQH 480
481 NELRDVYKKN GWKEQDFVSK HFTAH
|
| Detection Method: | |
| Confidence: | 60.221849 |
| Match: | 1xm9A |
| Description: | Structure of the armadillo repeat domain of plakophilin 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [704-767] |
1 11 21 31 41 51
| | | | | |
1 NTPPSSPNNV NNTLNRPMAS QGRTRYEDRT IQRGTSTLYS ANDSSGAVMS NESAMLSEMV 60
61 RKQL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
