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View Structure Prediction Details

Protein: gi|222624183, gi...
Organism: Oryza sativa Japonica Group
Length: 604 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222624183, gi....

Description E-value Query
Range
Subject
Range
KATAM_ORYSA - Xyloglucan galactosyltransferase KATAMARI1 homolog (EC 2.4.1.-) - Oryza sativa (Rice)
KATAM_ORYSJ - Xyloglucan galactosyltransferase KATAMARI1 homolog OS=Oryza sativa subsp. japonica GN=Os03g0144800 P...
678.0 [0..17] [604..1]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAMRRRPVL PTHQDDMEKV GGKPPQSRLC FLATLCAMFW VLIFYFHFFV IANEPGSAGA  60
   61 DTAAGAAASI ARAELPLPEP ERVSDPAVPL PPPALVSEPP PTTATVAKVE DEEKPTAVAH 120
  121 QEAAPRDYAF QRALKTAENK SDPCGGRYIY VHELPPRF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDDMLRECER LSLWTNMCKF MSNEGLGPPL GNEEGVFSNT GWYATNQFMV DVIFRNRMKQ  60
   61 YECLTKDSSI AAAVFVPFYA GFDVARYLWG HNISTRDAAS LDLIDWLRKR PEWNVMGGRD 120
  121 HFLVGGRIAW DFRRLTDEES DWGNKLLFMP AAKNMSMLVV ESSPWNANDF AIPYPTYFHP 180
  181 AKDADVLLWQ D

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.259637
Match: PF03016.6
Description: No description for PF03016.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [350-604]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMRSLERPWL FSFAGAPRPD DPKSIRSQLI DQCRTSSVCK LLECDLGESK CHSPSAIMNM  60
   61 FQNSLFCLQP QGDSYTRRSA FDSMLAGCIP VFFHPGSAYV QYTWHLPKNY TRYSVFIPED 120
  121 GVRKGNVSIE DRLKSIHPDM VKKMREEVIS LIPRVIYADP RSKLETLKDA FDVSVEAIIN 180
  181 KVTQLRRDII EDHEDKDFVE ENSWKYDLLE EGQRTIGPHE WDPFFSKPKD KGGDSTNPST 240
  241 NAAKNSWKNE QRGQN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.966
Match: 2nzwA
Description: No description for 2nzwA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.89798084233658 bayes_pls_golite062009
transferase activity 0.758148981665123 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.398470504821598 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle