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View Structure Prediction Details

Protein: MRPS15
Organism: Homo sapiens
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS15.

Description E-value Query
Range
Subject
Range
gi|114555553 - gi|114555553|ref|XP_524665.2| PREDICTED: mitochondrial ribosomal protein S15 [Pan troglodytes]
2.0E-71 [1..257] [1..257]
gi|12833594 - gi|12833594|dbj|BAB22586.1| unnamed protein product [Mus musculus]
7.0E-69 [1..256] [1..258]
RT15_RAT - 28S ribosomal protein S15, mitochondrial OS=Rattus norvegicus GN=Mrps15 PE=2 SV=1
1.0E-67 [1..256] [1..257]
gi|76614526 - gi|76614526|ref|XP_585783.2| PREDICTED: similar to mitochondrial ribosomal protein S15 isoform 1 [Bo...
5.0E-64 [1..257] [1..259]
gi|12005982 - gi|12005982|gb|AAG44697.1|AF265439_1 DC37 [Homo sapiens]
2.0E-62 [1..257] [27..283]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVAWRTLS LIRTRAVTQV LVPGLPGGGS AKFPFNQWGL QPRSLLLQAA RGYVVRKPAQ  60
   61 SRLDDDPPPS TLLKDYQNVP GIEKVDDVVK RLLSLEMAN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKEMLKIKQE QFMKKIVANP EDTRSLEARI IALSVKIRSY EEHLEKHRKD KAHKRYLLMS  60
   61 IDQRKKMLKN LRNTNYDVFE KICWGLGIEY TFPPLYYRRA HRRFVTKKAL CIRVFQETQK 120
  121 LKKRRRALKA AAAAQKQAKR RNPDSPAKAI PKTLKDSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2qalO
Description: No description for 2qalO was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle