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View Structure Prediction Details

Protein: gi|119623357, gi...
Organism: Homo sapiens
Length: 748 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119623357, gi....

Description E-value Query
Range
Subject
Range
gi|70878483 - gi|70878483|gb|EAN91735.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71649745 - gi|71649745|ref|XP_813586.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
3.0E-66 [4..737] [779..1516]
gi|37930527, gi|... - gi|37930527|gb|AAP74661.1| elicitor-like transglutaminase M81 [Phytophthora infestans], gi|23505399|...
3.0E-60 [2..733] [768..1505]
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
4.0E-57 [2..737] [824..1566]
SLAP1_CLOTH - Cell surface glycoprotein 1 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 ...
1.0E-56 [69..714] [1368..2017]
gi|88188037, gi|... - gi|88602575|ref|YP_502753.1| mucin 2, intestinal/tracheal [Methanospirillum hungatei JF-1], gi|88188...
5.0E-56 [3..726] [1427..2148]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
1.0E-55 [4..740] [179..915]
SLP1_CLOTM, SLAP... - (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein B) (S-layer protein 1), Cell sur...
4.0E-53 [69..674] [762..1367]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSGQETDW RSTAFRQKLV SQIEDAMRKA GVAHSKSSKD MESHVFLKAK TRDEYLSLVA  60
   61 RLIIHFRDIH NKKSQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.35
Match: 2gutA
Description: No description for 2gutA was found.

Predicted Domain #2
Region A:
Residues: [76-132]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASVSDPMNAL QSLTGGPAAG AAGIGMPPRG PGQSLGGMGS LGAMGQPMSL SGQPPPG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [133-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSGMAPHSMA VVSTATPQTQ LQLQQVALQQ QQQQQQFQQQ QQAALQQQQQ QQQQQQFQAQ  60
   61 QSAMQQQFQA VVQQQQQLQQ QQQQQQHLIK LHHQNQQQIQ QQQQQLQRIA QLQLQQQQQQ 120
  121 QQQQQQQQQQ ALQAQPPIQQ PPMQQPQPPP SQALPQQLQQ MHHTQHHQPP PQPQQPPVAQ 180
  181 NQPSQLPPQS QTQPLVSQAQ ALPGQMLYTQ PPLKFVRAPM VVQQPPVQPQ VQQQQTAVQT 240
  241 A

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [374-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAAQMVAPGV QVSQSSLPML SSPSPGQQVQ TPQSMPPPPQ PSPQPGQPSS QPNSNVSSGP  60
   61 APSPSSFLPS PSPQPSQSPV TARTPQNFSV PSPGPLNTPV NPSSVMS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [481-748]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAGSSQAEEQ QYLDKLKQLS KYIEPLRRMI NKIDKNEDRK KDLSKMKSLL DILTDPSKRC  60
   61 PLKTLQKCEI ALEKLKNDMA VPTPPPPPVP PTKQQYLCQP LLDAVLANIR SPVFNHSLYR 120
  121 TFVPAMTAIH GPPITAPVVC TRKRRLEDDE RQSIPSVLQG EVARLDPKFL VNLDPSHCSN 180
  181 NGTVHLICKL DDKDLPSVPP LELSVPADYP AQSPLWIDRQ WQYDANPFLQ SVHRCMTSRL 240
  241 LQLPDKHSVT ALLNTWAQSV HQACLSAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle