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View Structure Prediction Details

Protein: PDIA4
Organism: Homo sapiens
Length: 645 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDIA4.

Description E-value Query
Range
Subject
Range
PDIA4_MOUSE, PDA... - Protein disulfide-isomerase A4 OS=Mus musculus GN=Pdia4 PE=1 SV=2, (P08003) Protein disulfide-isomer...
0.0 [62..645] [55..638]
PDIA4_RAT - Protein disulfide-isomerase A4 OS=Rattus norvegicus GN=Pdia4 PE=1 SV=2
0.0 [62..645] [60..643]
PDIA4_BOVIN - Protein disulfide-isomerase A4 OS=Bos taurus GN=PDIA4 PE=2 SV=1
0.0 [1..645] [1..643]
gi|39645929 - gi|39645929|gb|AAH63979.1| Protein disulfide isomerase associated 4 [Danio rerio]
0.0 [7..645] [6..645]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPRKAFLLL LLLGLVQLLA VAGAEGPDED SSNRENAIED EEEEEEEDDD EEEDDLEVKE  60
   61 ENGVLVLNDA NFDNFVADKD TVLLEFYAPW CGHCKQFAPE YEKIANILKD KDPPIPVAKI 120
  121 DATSASVLAS RFDVSGYPTI KILKKGQAVD YEGSRTQEEI VAKVREVSQP DW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.39794
Match: 2dj1A
Description: No description for 2dj1A was found.

Predicted Domain #2
Region A:
Residues: [173-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPPPEVTLVL TKENFDEVVN DADIILVEFY APWCGHCKKL APEYEKAAKE LSKRSPPIPL  60
   61 AKVDATAETD LAKRFDVSGY PTLKIFRKGR PYDYNGPREK YGIVDYMIEQ SGPPSKEILT 120
  121 LKQVQEFLKD GDDVIIIGVF KGESDPAYQQ YQDAANNLRE DYKFHHTFST EIAKFLKVSQ 180
  181 GQLVVMQPEK FQSKYEPRSH MMDVQGSTQD SAIKDFVLKY ALPLVGHRKV SNDAKRYTRR 240
  241 PLVVVYYSVD FSFDYRAATQ FWRSKVLEVA KDFPEYTFAI ADEEDYAGEV KDLGLSESGE 300
  301 DVNAAILDES GKKFAMEPEE FDSDTLREFV TAFKKGKLKP VIKSQPVPKN NKGPVKVVVG 360
  361 KTFDSIVMDP KKDVLIEFYA PWCGHCKQLE PVYNSLAKKY KGQKGLVIAK MDATANDVPS 420
  421 DRYKVEGFPT IYFAPSGDKK NPVKFEGGDR DLEHLSKFIE EHATKLSRTK EEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle