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View Structure Prediction Details

Protein: C2orf44
Organism: Homo sapiens
Length: 721 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C2orf44.

Description E-value Query
Range
Subject
Range
gi|114576415 - gi|114576415|ref|XP_001143574.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
0.0 [1..721] [1..721]
gi|109102160 - gi|109102160|ref|XP_001097994.1| PREDICTED: hypothetical protein [Macaca mulatta]
0.0 [1..721] [1..721]
gi|214832565, gi... - gi|23272708|gb|AAH35698.1| C2orf44 protein [Homo sapiens], gi|214832565|ref|NP_001135791.1| hypothet...
0.0 [1..620] [1..620]
CB044_MOUSE - WD repeat and coiled-coil-containing protein C2orf44 homolog OS=Mus musculus PE=2 SV=2
0.0 [1..646] [1..638]
gi|109479106 - gi|109479106|ref|XP_001070724.1| PREDICTED: hypothetical protein [Rattus norvegicus]
0.0 [1..717] [1..717]
gi|73980607 - gi|73980607|ref|XP_853449.1| PREDICTED: hypothetical protein XP_848356 [Canis familiaris]
0.0 [1..690] [1..690]
CB044_CHICK - WD repeat and coiled-coil-containing protein C2orf44 homolog OS=Gallus gallus GN=RCJMB04_10h23 PE=2 ...
0.0 [1..709] [1..743]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELGKGKLLR TGLNALHQAV HPIHGLAWTD GNQVVLTDLR LHSGEVKFGD SKVIGQFECV  60
   61 CGLSWAPPVA DDTPVLLAVQ HEKHVTVWQL CPSPMESSKW LTSQTCEIRG SLPILPQGCV 120
  121 WHPKCAILTV LTAQDVSIFP NVHSDDSQVK ADINTQGRIH CACWTQDGLR LVVAVGSSLH 180
  181 SYIWDSAQKT LHRCSSCLVF DVDSHVCSIT ATVDSQVAIA TELPLDKICG LNASETFNIP 240
  241 PNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [244-475]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDMTPYALPV IGEVRSMDKE ATDSETNSEV SVSSSYLEPL DLTHIHFNQH KSEGNSLICL  60
   61 RKKDYLTGTG QDSSHLVLVT FKKAVTMTRK VTIPGILVPD LIAFNLKAHV VAVASNTCNI 120
  121 ILIYSVIPSS VPNIQQIRLE NTERPKGICF LTDQLLLILV GKQKLTDTTF LPSSKSDQYA 180
  181 ISLIVREIML EEEPSITSGE SQTTYSTFSA PLNKANRKKL IESLSPDFCH QN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [476-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGLLLTVNTS SQNGRPGRTL IKEIQSPLSS ICDGSIALDA EPVTQPASLP RHSSTPDHTS  60
   61 TLEPPRLPQR KNLQSEKETY QLSKEVEILS RNLVEMQRCL SELTNRLHNG K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [587-721]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSSSVYPLSQ DLPYVHIIYQ KPYYLGPVVE KRAVLLCDGK LRLSTVQQTF GLSLIEMLHD  60
   61 SHWILLSADS EGFIPLTFTA TQEIIIRDGS LSRSDVFRDS FSHSPGAVSS LKVFTGLAAP 120
  121 SLDTTGCCNH VDGMA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle