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View Structure Prediction Details

Protein: SC4MOL
Organism: Homo sapiens
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SC4MOL.

Description E-value Query
Range
Subject
Range
gi|109076099, gi... - gi|109076099|ref|XP_001101517.1| PREDICTED: sterol-C4-methyl oxidase-like isoform 3 [Macaca mulatta]...
3.0E-67 [1..293] [1..293]
gi|149642567, gi... - gi|61871492|ref|XP_580615.1| PREDICTED: similar to methyl sterol oxidase isoform 1 [Bos taurus], gi|...
4.0E-67 [1..293] [1..293]
MSMO1_PIG - Methylsterol monooxygenase 1 OS=Sus scrofa GN=MSMO1 PE=2 SV=1
6.0E-67 [1..293] [1..293]
MSMO1_MOUSE - Methylsterol monooxygenase 1 OS=Mus musculus GN=Msmo1 PE=1 SV=1
3.0E-64 [1..293] [1..293]
gi|57096891 - gi|57096891|ref|XP_532714.1| PREDICTED: similar to C-4 methylsterol oxidase (Methylsterol monooxygen...
8.0E-64 [1..281] [1..281]
MSMO1_RAT - Methylsterol monooxygenase 1 OS=Rattus norvegicus GN=Msmo1 PE=2 SV=1
2.0E-63 [1..293] [1..293]
MSMO1_MACFA - Methylsterol monooxygenase 1 OS=Macaca fascicularis GN=MSMO1 PE=2 SV=1
2.0E-62 [1..281] [1..281]
MSMO1_CHICK - Methylsterol monooxygenase 1 OS=Gallus gallus GN=MSMO1 PE=2 SV=1
2.0E-61 [1..292] [1..295]
MSMO1_DANRE - Methylsterol monooxygenase 1 OS=Danio rerio GN=msmo1 PE=2 SV=1
3.0E-60 [1..290] [1..290]
gi|111309060, gi... - gi|118404304|ref|NP_001072809.1| sterol-C4-methyl oxidase-like [Xenopus (Silurana) tropicalis], gi|1...
3.0E-58 [1..292] [1..292]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATNESVSIF SSASLAVEYV DSLLPENPLQ EPFKNAWNYM LNNYTKFQIA TWGSLIVHEA  60
   61 LYFLFCLPGF LFQFIPYMKK YKIQKD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPETWENQWK CFKVLLFNHF CIQLPLICGT YYFTEYFNIP YDWERMPRWY FLLARCFGCA  60
   61 VIEDTWHYFL HRLLHHKRIY KYIHKVHHEF QAPFGMEAEY AHPLETLILG TGFFIGIVLL 120
  121 CDHVILLWAW VTIRLLETID VHSGYDIPLN PLNLIPFYAG SRHHDFHHMN FIGNYASTFT 180
  181 WWDRIFGTDS QYNAYNEKRK KFEKKTE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 34.443697
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle