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View Structure Prediction Details

Protein: dyf-6
Organism: Caenorhabditis elegans
Length: 471 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dyf-6.

Description E-value Query
Range
Subject
Range
gi|86279109 - gi|86279109|gb|ABC88649.1| intraflagellar transport protein variant a [Caenorhabditis elegans]
729.0 [0..1] [471..4]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETTAPMI INEKSSLPVK SEPGQLGNPI SDESSEDEQS QIRALEEDQG IYYNEEVVAS  60
   61 PKNESDDDIP LRRIQLSHQT STQQHPEDSE PQEVIDVNDI ELPAGEAQPN MERRRSVRFS 120
  121 GRHDEEEDGR NKHFRTPSPE SLRYIQALEN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMAANGEFEE EFNDLADPQV QPPPMGSPPA YTSADEGPKT PPPRASAGSN MRQESMNELI  60
   61 MRKISDPLQN LIRRASRLED DSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [234-377]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDDDDDDDDE DDDYTEDEIA ILTYIDAYKT QEVELRPQLR PFTIEYIPAM GDVDLFIKVP  60
   61 RPDEIDDNVG LTQIDEPPSN QSDATIVDMQ IRNATKDAAI LDDDVPVKLL ERADENPDEI 120
  121 KKWISDIKEF HKSKPAQTVH YRTQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [378-471]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPDVETLMQE WPQKLEEVLK TTKIPSAELD VSLEKYVEIC LNIVDIPVGK SRIEALHLMF  60
   61 SLLNEFNNSQ HFRNLAQNNN LGGETGETMD RLEL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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