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View Structure Prediction Details

Protein: CE39964
Organism: Caenorhabditis elegans
Length: 266 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39964.

Description E-value Query
Range
Subject
Range
ADARB2 - adenosine deaminase, RNA-specific, B2 (RED2 homolog rat)
258.0 [0..24] [265..435]

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Predicted Domain #1
Region A:
Residues: [1-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLHLFLRVL IFQTSPIFKF QLSIVAVKLI ILFMKLMPPI DNNNDEIPCS KTYSAEEIDQ  60
   61 FATRSFFKSV NNFMRILVLS EPRKGFIRFL IKEIKKTENT NTSLLFMIND DAELEMKPSC 120
  121 QIYLYSTHDT NHCIMNKLRR WIMLGVQGAL LSNILAPIHI SKIIIGTTPP VPIHDIRNIL 180
  181 FSKLDIRDRV IPTMEAVKRI SPTKSLDRTF LWFQGLNGLD YSRAKKKAGH YQHLKKILYK 240
  241 KWESENNGKW IKRKSNQVDK FWIEVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.69897
Match: 1zy7A
Description: Crystal structure of the catalytic domain of an adenosine deaminase that acts on RNA (hADAR2) bound to inositol hexakisphosphate (IHP)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle