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View Structure Prediction Details

Protein: gi|110739176, gi...
Organism: Arabidopsis thaliana
Length: 536 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110739176, gi....

Description E-value Query
Range
Subject
Range
P4KG8_ARATH - Phosphatidylinositol 4-kinase gamma 8 OS=Arabidopsis thaliana GN=PI4KG8 PE=2 SV=2
553.0 [0..4] [536..1]
gi|92894700 - gi|92894700|gb|ABE92357.1| Phosphatidylinositol 3- and 4-kinase, catalytic [Medicago truncatula]
501.0 [0..15] [536..71]
gi|125591995, gi... - gi|50929499|ref|XP_474277.1| OSJNBa0043A12.14 [Oryza sativa (japonica cultivar-group)], gi|32488384|...
gi|90399241 - gi|90399241|emb|CAH68315.1| B0811B10.16 [Oryza sativa (indica cultivar-group)]
485.0 [0..15] [536..58]
gi|90657540 - gi|90657540|gb|ABD96840.1| hypothetical protein [Cleome spinosa]
479.0 [0..15] [536..82]

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Predicted Domain #1
Region A:
Residues: [1-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNCMAVALDP LTDRFSQFSR SSQRCRLQSL TNLDFNFLGF NTKQTNLSAS SHSLNNRSVS  60
   61 TPCFSISGSN LDGSATPHIE ILGGQRVPTV RSLVAEVTIA IVSGAQPLLL PSGLGGAYLL 120
  121 QTEKGNNIAV AKPVDEEPLA FNNPKGSGGL TLGQPGMKRS IRVGESGIRE LAAYLLDHQG 180
  181 FSSVPPTALV RISHVPFHDR GSDHAAYKVA SLQRFVGHDF DAGEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [226-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPGSFTVVSV HRIGILDVRV LNLDRHAGNM LVKKIHDQDE TTCSNGVGAA ELVPIDHGLC  60
   61 LPECLDDPYF EWLNWPQASV PFTDIELQYI SNLDPFKDAE LLRTELDSIQ ESSLRVLIVC 120
  121 TIFLKEAAAA GLSLAEIGEK MTRDICRGEE SSSVLEILCN KAKASAVSGS DDDDDYSSEW 180
  181 NEVEAELECG IFQFDDEVEC KELP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [430-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DMLQVPIFTR VPSIAANLSA LMRCPPNQWI STYDTNIEEE RRDRSIVRSK SHPICVNYDE  60
   61 KEGVYFGDMS GDEWEMFLHS FQMLLPEALE GSTSKGPKPR FGSSCKF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle