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View Structure Prediction Details

Protein: FACR5_ARATH
Organism: Arabidopsis thaliana
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for FACR5_ARATH.

Predicted Domain #1
Region A:
Residues: [1-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELNCVQFLR NKTILVTGAT GFLAKVFVEK ILRVQPNVKK LYLLVRASDN EAATKRLRTE  60
   61 VFEKELFKVL RQNLGDEKLN TLLYEKVVSV PGDIATDQLG INDSHLRERM QKEIDIVVNV 120
  121 AATTNFDERY DVGLGINTFG ALNVLNFAKK CVKVQLLLHV STAYVCGEKP GLIPEKPFIM 180
  181 EEIRNENGLQ LDINLERELM KQRLKELNEQ DCSEEDITLS MKELGMERAK LHGWPNTYVF 240
  241 TKSMGEMLLG KHKENLPLVI IRPTMITSTL SEPFPGWIEG LRTVDSVIIA YGKGVLKCFL 300
  301 VDVNSVCDMI PVDMVANAMI TAAAKHAGGS GVHMVYHVGS SHQNPVTFGE IHEIAVRYFT 360
  361 KNPLRSRNGS LITVSKVRFI PTMALFSLYM TLRYKLPLQL LKLVDIIYPW RN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.30103
Match: 1udcA
Description: STRUCTURE OF UDP-GALACTOSE-4-EPIMERASE COMPLEXED WITH UDP-MANNOSE
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [413-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDKYGDKNRK IELVMRLVEL YEPYVLFKGI FDDRNTKSLC ANQKEEEIKN TEKLMFDFDP  60
   61 KGINWGDYLT NIHISGLVTH VLKK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 5.30103
Match: PF03015.11
Description: No description for PF03015.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle