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View Structure Prediction Details

Protein: gi|119604240, gi...
Organism: Homo sapiens
Length: 538 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119604240, gi....

Description E-value Query
Range
Subject
Range
MYH4_PIG - Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
9.0E-54 [2..537] [1034..1571]
MYH2_HORSE - Myosin-2 OS=Equus caballus GN=MYH2 PE=2 SV=1
3.0E-53 [2..537] [1034..1571]
gi|225000798 - gi|225000798|gb|AAI72386.1| Myosin, heavy chain 8, skeletal muscle, perinatal [synthetic construct]
MYH8 - myosin, heavy chain 8, skeletal muscle, perinatal
4.0E-53 [2..537] [1035..1572]
MYH4_RAT - Myosin-4 OS=Rattus norvegicus GN=Myh4 PE=1 SV=1
5.0E-53 [2..537] [1036..1573]
MYH4_CANLF - Myosin-4 OS=Canis lupus familiaris GN=MYH4 PE=3 SV=1
5.0E-53 [2..537] [1036..1573]
MYH1_MOUSE - Myosin-1 OS=Mus musculus GN=Myh1 PE=1 SV=1
5.0E-53 [2..537] [1039..1576]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDFERRREL RRQKREEMRL EAERIAYQRN DDDEEEAARE RRRRARQERL RQKQEEESLG  60
   61 QVTDQVEVNA QNSVPDEEAK TTTTNTQVEG DDEAAFLERL ARREERRQKR LQEALERQKE 120
  121 FDPTITDASL SLPSRRMQND TAENETTEKE EKSESRQERY EIEETETVT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [170-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSYQKNDWRD AEENKKEDKE KEEEEEEKPK RGSIGENQIK DEKIKKDKEP KEEVKSFMDR  60
   61 KKGFTEVKSQ NGEFMTHKLK HTENTFSRPG GRASVDTKEA EGAPQVEAGK RLEELRRRRG 120
  121 ETESEEFEKL KQKQQEAALE LEELKKKREE RRKVLEEEEQ RRKQEEADRK LREEEEKRRL 180
  181 KEEIERRRAE AAEKRQKMPE DGLSDDKKPF KCFTPKGSSL KIEERAEFLN KSVQKSSGVK 240
  241 STHQAAIVSK IDSRLEQYTS AIEGTKSAKP TKPAASDLPV PAEGVRNIKS MWEKGNVFSS 300
  301 PTAAGTPNKE TAGLKVGVSS RINEWLTKTP DGNKSPAPKP SDLRPGDVSS KRNLWEKQSV 360
  361 DKVTSPTKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle