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View Structure Prediction Details

Protein: FGFR1OP
Organism: Homo sapiens
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FGFR1OP.

Description E-value Query
Range
Subject
Range
FR1OP_MOUSE - FGFR1 oncogene partner OS=Mus musculus GN=Fgfr1op PE=1 SV=1
0.0 [13..399] [13..399]
FR1OP_RAT - FGFR1 oncogene partner OS=Rattus norvegicus GN=Fgfr1op PE=1 SV=1
0.0 [13..399] [13..399]
gi|114610226 - gi|114610226|ref|XP_527596.2| PREDICTED: similar to FGFR1 oncogene partner (FOP) [Pan troglodytes]
0.0 [11..399] [11..399]
gi|109073283 - gi|109073283|ref|XP_001102430.1| PREDICTED: similar to FGFR1 oncogene partner isoform a isoform 1 [M...
0.0 [11..399] [11..399]
gi|158260715, gi... - gi|56208211|emb|CAI19643.1| FGFR1 oncogene partner [Homo sapiens], gi|36287110|ref|NP_919410.1| FGFR...
0.0 [11..399] [11..379]
FR1OP_BOVIN - FGFR1 oncogene partner OS=Bos taurus GN=FGFR1OP PE=2 SV=1
0.0 [11..399] [11..399]
FR1OP_MACFA - FGFR1 oncogene partner OS=Macaca fascicularis GN=FGFR1OP PE=2 SV=1
0.0 [11..399] [11..379]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAAAVVA EEDTELRDLL VQTLENSGVL NRIKAELRAA VFLALEEQEK VENKTPLVNE  60
   61 SLKKFLNTKD GRLVASLVAE FLQFFNLDFT LAVFQPETST LQGLEGRENL ARDLGIIEAE 120
  121 GTVGGPLLLE VIRRCQQKEK GPTTGEGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.154902
Match: 2d68A
Description: No description for 2d68A was found.

Predicted Domain #2
Region A:
Residues: [149-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDLSDVHSPP KSPEGKTSAQ TTPSKIPRYK GQGKKKTSGQ KAGDKKANDE ANQSDTSVSL  60
   61 SEPKSKSSLH LLSHETKIGS FLSNRTLDGK DKAGLC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [245-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDEDDMEGDS FFDDPIPKPE KTYGLRKEPR KQAGSLASLS DAPPLKSGLS SLAGAPSLKD  60
   61 SESKRGNTVL KDLKLISDKI GSLGLGTGED DDYVDDFNST SHRSEKSEIS IGEEIEEDLS 120
  121 VEIDDINTSD KLDDLTQDLT VSQLSDVADY LEDVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle