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View Structure Prediction Details

Protein: CFDP1
Organism: Homo sapiens
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CFDP1.

Description E-value Query
Range
Subject
Range
gi|114663698 - gi|114663698|ref|XP_511111.2| PREDICTED: similar to BCNT isoform 4 [Pan troglodytes]
3.0E-47 [1..299] [1..299]
gi|109129226 - gi|109129226|ref|XP_001110030.1| PREDICTED: similar to craniofacial development protein 1 isoform 4 ...
4.0E-47 [1..299] [1..299]
gi|73957383 - gi|73957383|ref|XP_546829.2| PREDICTED: similar to craniofacial development protein 1 [Canis familia...
2.0E-46 [1..299] [1..299]
CFDP1_MUNRE - Craniofacial development protein 1 OS=Muntiacus reevesi GN=CFDP1 PE=2 SV=1
1.0E-45 [1..299] [1..298]
CFDP1_BOVIN - Craniofacial development protein 1 OS=Bos taurus GN=CFDP1 PE=2 SV=1
1.0E-45 [1..299] [1..297]
CFDP1_RAT - Craniofacial development protein 1 OS=Rattus norvegicus GN=Cfdp1 PE=1 SV=1
7.0E-44 [1..299] [1..295]
gi|3115274 - gi|3115274|emb|CAA69396.1| cp27 [Mus musculus]
2.0E-43 [1..299] [1..295]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEFDSEDFS TSEEDEDYVP SGGEYSEDDV NELVKEDEVD GEEQTQKTQG KKRKAQSIPA  60
   61 RKRRQGGLSL EEEEEEDANS ESEGSSSEEE DDAAEQEKGI GSEDARKKKE DELWASFLND 120
  121 VGPKSKVPPS TQVKKGEETE ETSSSKLLVK AEELEKPKET EKVKITKVFD FAGEEVRVTK 180
  181 EVDATSKEAK SFFKQNEKEK PQANVPSALP SLPAGSGL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [219-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRSSGMSSLL GKIGAKKQKM STLEKSKLDW ESFKEEEGIG EELAIHNRGK EGYIERKAFL  60
   61 DRVDHRQFEI ERDLRLSKMK P

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.080922
Match: PF07572.3
Description: No description for PF07572.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle