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View Structure Prediction Details

Protein: gi|32567786, gi|...
Organism: Homo sapiens
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|32567786, gi|....

Description E-value Query
Range
Subject
Range
gi|73996463 - gi|73996463|ref|XP_543641.2| PREDICTED: similar to keratin 6L [Canis familiaris]
293.0 [0..1] [535..1]
gi|109096851 - gi|109096851|ref|XP_001099606.1| PREDICTED: similar to keratin 6L isoform 2 [Macaca mulatta]
289.0 [0..1] [535..1]
KRT79 - keratin 79
274.0 [0..1] [535..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSVSRQTY STKGGFSSNS ASGGSGSQAR TSFSSVTVSR SSGSGGGAHC GPGTGGFGSR  60
   61 SLYNLGGHKS ISVSVAGGAL LGRALGGFGF GSRAFMGQGA GRQTFGPACP PG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIQEVTVNQS LLTPLHVEID PEIQRVRTQE REQIKTLNNK FASFIDKVRF LEQQNKVLET  60
   61 KWALLQEQGQ NLGVTRNNLE PLFEAYLGSM RSTLDRLQSE RGRLDSELRN VQDLVEDFKN 120
  121 KYEDEINKHT AAENEFVVLK KDVDAAYMGR MDLHGKVGTL TQEIDFLQQL YEMELSQVQT 180
  181 HVSNTNVVLS MDNNRNLDLD SIIAEVKAQY ELIAQRSRAE AEAWYQTKYE ELQVTAGKHG 240
  241 DNLRDTKNEI AELTRTIQRL QGEADAAKKQ CQQLQTAIAE AEQRGELALK DAQKKLGDLD 300
  301 VALHQAKEDL TRLLRDYQEL MNVKLALDVE IATYRKLLES EESRMSGE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [461-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPSAVSISVT GNSTTVCGGG AASFGGGISL GGSGGATKGG FSTNVGYSTV KGGPVSAGTS  60
   61 ILRKTTTVKT SSQRY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle