YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ATG7
Organism: Homo sapiens
Length: 703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG7.

Description E-value Query
Range
Subject
Range
gi|109034365 - gi|109034365|ref|XP_001088170.1| PREDICTED: similar to APG7 autophagy 7-like isoform 4 [Macaca mulat...
0.0 [1..703] [1..703]
ATG7_RAT - Ubiquitin-like modifier-activating enzyme ATG7 OS=Rattus norvegicus GN=Atg7 PE=2 SV=1
0.0 [5..703] [1..698]
ATG7_MOUSE - Ubiquitin-like modifier-activating enzyme ATG7 OS=Mus musculus GN=Atg7 PE=1 SV=1
0.0 [5..703] [1..698]
gi|73984600 - gi|73984600|ref|XP_849849.1| PREDICTED: similar to APG7 autophagy 7-like isoform 3 [Canis familiaris...
0.0 [1..703] [1..703]
gi|222144227, gi... - gi|222144227|ref|NP_001129503.2| APG7 autophagy 7-like isoform b [Homo sapiens], gi|12652685|gb|AAH0...
0.0 [1..703] [1..676]

Back

Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATGDPGL SKLQFAPFSS ALDVGFWHEL TQKKLNEYRL DEAPKDIKGY YYNGDSAGLP  60
   61 ARLTLEFSAF DMSAPTPARC CPAIGTLYNT NTLESFKTAD KKLLLEQAAN EIWESIKSGT 120
  121 ALENPVLLNK FLLLTFADLK KYHFYYWFCY PALCLPESLP LIQG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVGLDQRFSL KQIEALECAY DNLCQTEGVT ALPYFLIKYD ENMVLVSLLK HYSDFFQGQR  60
   61 TKITIGVYDP CNLAQYPGWP LRNFLVLAAH RW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [257-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSFQSVEVV CFRDRTMQGA RDVAHSIIFE VKLPEMAFSP DCPKAVGWEK NQKGGMGPRM  60
   61 VNLSECM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [324-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPKRLAESSV DLNLKLMCWR LVPTLDLDKV VSVKCLLLGA GTLGCNVART LMGWGVRHIT  60
   61 FVDNAKISYS NPVRQPLYEF EDCLGGGKPK ALAAADRLQK IFPGVNARGF NMSIPMPGHP 120
  121 VNFSSVTLEQ ARRDVEQLEQ LIESHDVVFL LMDTRESRWL PAVIAASKRK LVINAALGFD 180
  181 TFVVMRHGLK KPKQQGAGDL CPNHPVASAD LLGSSLFANI PGYKLGCYFC NDVVAPGDST 240
  241 RDRTLDQQCT VSRPGLAVIA GALAVELMVS VLQHPEGGYA IASSSDDRMN EPPTSLGLVP 300
  301 HQIRGFLSRF DNVLPV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.39794
Match: 2nvuB
Description: No description for 2nvuB was found.

Predicted Domain #5
Region A:
Residues: [640-703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLAFDKCTAC SSKVLDQYER EGFNFLAKVF NSSHSFLEDL TGLTLLHQET QAAEIWDMSD  60
   61 DETI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle