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View Structure Prediction Details

Protein: PBLD
Organism: Homo sapiens
Length: 288 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PBLD.

Description E-value Query
Range		 Subject
Range
PHZ2_MOUSE - (Q9DCG6) Probable oxidoreductase 0610038K03Rik
 2.0E-73 [1..288] [1..288]
gi|114630773, gi... - gi|114630779|ref|XP_001168064.1| PREDICTED: MAWD binding protein isoform 7 [Pan troglodytes], gi|114...
 3.0E-72 [1..288] [1..288]
PBLD_RAT - Phenazine biosynthesis-like domain-containing protein OS=Rattus norvegicus GN=Pbld PE=2 SV=1
 3.0E-71 [1..288] [1..288]
gi|109089606 - gi|109089606|ref|XP_001086075.1| PREDICTED: MAWD binding protein [Macaca mulatta]
 3.0E-70 [1..288] [1..288]
MAWBP_PONPY, PBL... - Phenazine biosynthesis-like domain-containing protein - Pongo pygmaeus (Orangutan), (Q5RDZ1) Probabl...
PBLD_PONAB - Phenazine biosynthesis-like domain-containing protein OS=Pongo abelii GN=PBLD PE=2 SV=1
 5.0E-70 [1..287] [1..287]
PBLD_BOVIN - Phenazine biosynthesis-like domain-containing protein OS=Bos taurus GN=PBLD PE=2 SV=1
 6.0E-70 [1..288] [1..288]

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Predicted Domain #1
Region A:
Residues: [1-288] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPIFIADA FTARAFRGNP AAVCLLENEL DEDMHQKIAR EMNLSETAFI RKLHPTDNFA  60
   61 QSSCFGLRWF TPASEVPLCG HATLASAAVL FHKIKNMNST LTFVTLSGEL RARRAEDGIV 120
  121 LDLPLYPAHP QDFHEVEDLI KTAIGNTLVQ DICYSPDTQK LLVRLSDVYN RSFLENLKVN 180
  181 TENLLQVENT GKVKGLILTL KGEPGGQTQA FDFYSRYFAP WVGVAEDPVT GSAHAVLSSY 240
  241 WSQHLGKKEM HAFQCSHRGG ELGISLRPDG RVDIRGGAAV VLEGTLTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.0
Match: 1s7jA
Description: Crystal structure of phenazine biosynthesis protein PhzF family (Enterococcus faecalis)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.00848565859536 bayes_pls_golite062009
amino-acid racemase activity 0.0628393252100677 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle