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View Structure Prediction Details

Protein: RPL31
Organism: Homo sapiens
Length: 125 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL31.

Description E-value Query
Range
Subject
Range
gi|50730448 - gi|50730448|ref|XP_416909.1| PREDICTED: similar to ribosomal protein L31 [Gallus gallus]
4.0E-64 [1..125] [48..172]
gi|73956853 - gi|73956853|ref|XP_546758.2| PREDICTED: similar to ribosomal protein L31 [Canis familiaris]
6.0E-63 [2..125] [72..194]
gi|148672373, gi... - gi|94399943|ref|XP_001002948.1| PREDICTED: similar to ribosomal protein L31 [Mus musculus], gi|94399...
1.0E-57 [1..125] [32..156]
gi|109470820, gi... - ref|XP_345434.1| similar to ribosomal protein L31 [Rattus norvegicus], gi|109470820|ref|XP_001081153...
1.0E-56 [2..125] [4..127]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPAKKGGEK KKGRSAINEV VTREYTINIH KRIHGVGFKK RAPRALKEIR KFAMKEMGTP  60
   61 DVRIDTRLNK AVWAKGIRNV PYRIRVRLSR KRNEDEDSPN KLYTLVTYVP VTTFKNLQTV 120
  121 NVDEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.0
Match: 1s1iW
Description: Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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