YRC Public Data Repository - Protein Structure Prediction

Protein:	FKBP2
Organism:	Homo sapiens
Length:	142 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FKBP2.

Description	E-value	Query Range	Subject Range
gi\|109463454, gi... - gi\|62641808\|ref\|XP_215196.2\| PREDICTED: similar to FK506-binding protein 2 precursor (Peptidyl-proly...	6.0E-40	[1..142]	[51..190]
gi\|109105593, gi... - gi\|109105595\|ref\|XP_001115137.1\| PREDICTED: similar to FK506-binding protein 2 precursor isoform 2 [...	9.0E-40	[1..142]	[1..142]
gi\|60688486 - gi\|60688486\|gb\|AAH91475.1\| FK506 binding protein 2, 13kDa [Homo sapiens]	3.0E-39	[1..142]	[1..142]
gi\|114638287 - gi\|114638287\|ref\|XP_001164246.1\| PREDICTED: FK506-binding protein 2 [Pan troglodytes]	3.0E-39	[1..142]	[1..142]
gi\|73983269 - gi\|73983269\|ref\|XP_853295.1\| PREDICTED: similar to FK506-binding protein 2 precursor (Peptidyl-proly...	5.0E-39	[1..142]	[22..161]
FKBP2_MOUSE - Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Mus musculus GN=Fkbp2 PE=1 SV=1	8.0E-39	[1..142]	[1..140]
gi\|148230328, gi... - gi\|49119195\|gb\|AAH72927.1\| MGC80429 protein [Xenopus laevis], gi\|148230328\|ref\|NP_001085559.1\| MGC80...	1.0E-38	[3..142]	[4..141]

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Predicted Domain #1

Region A:
Residues: [1-142]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSWFRVLT VLSICLSAVA TATGAEGKRK LQIGVKKRVD HCPIKSRKGD VLHMHYTGKL  60
   61 EDGTEFDSSL PQNQPFVFSL GTGQVIKGWD QGLLGMCEGE KRKLVIPSEL GYGERGAPPK 120
  121 IPGGATLVFE VELLKIERRT EL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.30103
Match:	2pbcA
Description:	No description for 2pbcA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits