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View Structure Prediction Details

Protein: YPL119C-A
Organism: Saccharomyces cerevisiae
Length: 87 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YPL119C-A.

Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPLVDELTL SRYLTHGTSV LSSSLYSVAF FLFFFPNFLF FCSCPNHKWV SLPFIGMDIL  60
   61 EALCFYREGK IRNIFEIGGL LLQSFYN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.722 a.4.12 TrpR-like
View Download 0.722 a.4.12 TrpR-like
View Download 0.606 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.599 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.542 d.51.1 Eukaryotic type KH-domain (KH-domain type I)
View Download 0.484 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.463 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.420 a.4.12 TrpR-like
View Download 0.417 d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.368 a.64.1 Saposin


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle