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View Structure Prediction Details

Protein: OSW2
Organism: Saccharomyces cerevisiae
Length: 724 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OSW2.

Description E-value Query
Range
Subject
Range
OSW2 - Protein of unknown function proposed to be involved in the assembly of the spore wall
714.0 [0..220] [724..8]

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Predicted Domain #1
Region A:
Residues: [1-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEENQLTCLI VGETPAAQFL GWRLSLSNSF IILVSQYVSS DELVAWKSTK LGANFYTPNI  60
   61 LTKDIKELHH KLKHNGANTY SIDIVLVSAI SLQSFETTCR LLSDYTNDNT TVLISTDFGC 120
  121 ELEPIAISYF GGKCKCVISI SCEVECRQLS LGSYALVNDD QCVITLGLTY CDANFEASPT 180
  181 ILENTKAASL ELQGIKGSNV RRFLLGLTVA KWMKSKLILD PKQMALKMWE LLIPKISLNI 240
  241 LSIIYEQFDY EKMLENKSTE IIFKDLVKEL LGICFAQCGS KIARFLLVKS QGEEEINFGK 300
  301 IVEYCKGKKL QLINSTANEH PEYLSLPFEP YCFYHRFEYP AQILLHQPII LAKKYGVSCS 360
  361 NLNFLYGFYT RLLTLSGLSI N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 2ew2A
Description: Crystal Structure of the Putative 2-Dehydropantoate 2-Reductase from Enterococcus faecalis
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [382-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGRCEHALSM LDSRIGGGIN VASGINSGQD FTDGDNEDQD KGKNRVDKNV KEGSFISLTQ  60
   61 RFTMTSPLGV NDPALPADLE KLYLGAEYIS NCDANTSGGQ KRVKSPTKAD TGYDDKHLPD 120
  121 DTIHTF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [508-724]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDEYLADEDD FSCLGIDKRS STKPTKPLEK FGVVAVPHFI RRFSIKRSSK DKSNDMKRPY  60
   61 TTSSLELQLR SNHFMFAKEY QDLHRQLYYE VKPRTQSELD ARRRNYSELE SQMWKIKHRF 120
  121 NIHRGALPRP RTNPYELLLD HIDVLNRGNT GDILRFTTSR YGGVDTYDSI LRDQSTIMEL 180
  181 LDKRCAYSPP VLFDNEAKER DHDRDCYQDY NHDHRSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle