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View Structure Prediction Details

Protein: YDL144C
Organism: Saccharomyces cerevisiae
Length: 356 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL144C.

Description E-value Query
Range
Subject
Range
YDL144C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
236.0 [0..1] [356..4]

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Predicted Domain #1
Region A:
Residues: [1-356]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRILVIGAG GVGVITALSL WLKKESDVSL VVRSDYDRVL KHGYTIESCD YGRLEGWRPH  60
   61 HIYSSVEDAA SAADNQGYNY IVVTTKNIID GPVNSRVSNI IRPVLEKNKE LHGPQLTTHI 120
  121 LLVQNGIDIE KEIWAEFPRE QYRYTVLSGI QLIGSTKIGS GHISQVGQDH LSCGAFDPQD 180
  181 AAAIQAANDF VRMYSNEGQN FVEFDPRVRY SRWKKLLYNA AINTSTALVG LDVPRCLEFG 240
  241 VNKKSTEIEV FHPAMREIIA IAASEGIIIE EEFITMFTEI TRKKVFKPSM CVDCEKGQLM 300
  301 ELEVILGNPI RIAKRNGVAT PTLSILYNLL VLVQAKLKER KGLLKFDEKT ATLVDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.522879
Match: 2ew2A
Description: Crystal Structure of the Putative 2-Dehydropantoate 2-Reductase from Enterococcus faecalis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle