YRC Public Data Repository - Protein Structure Prediction

Protein:	IZH2
Organism:	Saccharomyces cerevisiae
Length:	317 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IZH2.

Description	E-value	Query Range	Subject Range
ADR2_MOUSE - Adiponectin receptor protein 2 OS=Mus musculus GN=Adipor2 PE=1 SV=2	4.0E-79	[1..315]	[78..380]
ADIPOR2 - adiponectin receptor 2 gi\|114642805 - gi\|114642805\|ref\|XP_508922.2\| PREDICTED: adiponectin receptor 2 [Pan troglodytes]	3.0E-78	[1..315]	[78..380]
CG5315-PA, CG531... - This gene is referred to in FlyBase by the symbol Dmel\CG5315 (CG5315, FBgn0038984). It is a protein... gi\|220953776, gi... - gi\|220953776\|gb\|ACL89431.1\| CG5315-PA [synthetic construct], gi\|220943902\|gb\|ACL84494.1\| CG5315-PA [...	2.0E-77	[1..316]	[123..438]
gi\|39580647, gi\|... - gi\|39580647\|emb\|CAE61329.1\| Hypothetical protein CBG05167 [Caenorhabditis briggsae], gi\|187035172\|em... gi\|157773563 - gi\|157773563\|ref\|XP_001664847.1\| hypothetical protein CBG05167 [Caenorhabditis briggsae AF16]	2.0E-77	[5..315]	[233..547]
gi\|182891570, gi... - gi\|47087283\|ref\|NP_998665.1\| adiponectin receptor 1 [Danio rerio], gi\|27882260\|gb\|AAH44388.1\| Adipon...	6.0E-77	[6..315]	[63..371]
gi\|46485456, gi\|... - gi\|46485456\|ref\|NP_997470.1\| adiponectin receptor 1 [Rattus norvegicus], gi\|38197440\|gb\|AAH61838.1\| ...	3.0E-76	[6..315]	[59..369]
paqr-2 - status:Partially_confirmed UniProt:Q9N536 protein_id:AAF60489.2	4.0E-76	[5..316]	[228..543]
gi\|147902276, gi... - gi\|27696972\|gb\|AAH44035.1\| Adipor1-prov protein [Xenopus laevis], gi\|147902276\|ref\|NP_001080721.1\| a...	5.0E-75	[6..315]	[65..375]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLLERTKS VQELKKRAAG KTSANPAEVA KAKKVLRRLY SWDEIPEWQR DNDFILHGYV  60
   61 KETSSFIETF KSLFYLHNES VNIYSHLIPA LGFFTVLLLD KSTIKVFATT TWLDHMVIDL 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [121-317]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FYSGAFACLI LSSSFHCLKS HSLRIATLGN KLDYLGICIL IVTSMVSILY YGYFEKFSLF  60
   61 CLFALITVSF GIACSIVSLK DKFRKREWRP YRAGLFVCFG LSSIIPIFSG LYCYSFSEIW 120
  121 TQIQLFWVLL GGVLYIIGAV LYGMRFPEKI CPGKFDIWGH SHQLFHFLVV IAALCHLRGL 180
  181 LNSYELVHIK MENGIVS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits