| Protein: | ARR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 294 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..294] | [1..294] |
|
|
8.0E-29 | [16..158] | [116..250] |
|
|
1.0E-25 | [4..121] | [38..154] |
|
|
2.0E-25 | [4..121] | [48..164] |
|
|
3.0E-22 | [3..119] | [133..244] |
|
|
3.0E-21 | [12..116] | [324..435] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MAKPRGRKGG RKPSLTPPKN KRAAQLRASQ NAFRKRKLER LEELEKKEAQ LTVTNDQIHI 60
61 LKKENELLHF MLRSLLTERN MPSDERNISK ACCEEKPPTC NTLDGSVVLS STYNSLEIQQ 120
121 CYVFFKQLLS VCVGKN
|
| Detection Method: |  |
| Confidence: | 33.9897 |
| Match: | 1gd2E_ |
| Description: | PAP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [137-294] |
1 11 21 31 41 51
| | | | | |
1 CTVPSPLNSF DRSFYPIGCT NLSNDIPGYS FLNDAMSEIH TFGDFNGELD STFLEFSGTE 60
61 IKEPNNFITE NTNAIETAAA SMVIRQGFHP RQYYTVDAFG GDVLLSAMDI WSFMKVHPKV 120
121 NTFDLEILGT ELKKSATCSN FDILISLKHF IKVFSSKL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [201-294] |
1 11 21 31 41 51
| | | | | |
1 NNFITENTNA IETAAASMVI RQGFHPRQYY TVDAFGGDVL LSAMDIWSFM KVHPKVNTFD 60
61 LEILGTELKK SATCSNFDIL ISLKHFIKVF SSKL
|
| Detection Method: | |
| Confidence: | 1.29 |
| Match: | 1sseB |
| Description: | Solution structure of the oxidized form of the Yap1 redox domain |
Matching Structure (courtesy of the PDB): |
|
