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View Structure Prediction Details

Protein: MLC2
Organism: Saccharomyces cerevisiae
Length: 163 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MLC2.

Description E-value Query
Range		 Subject
Range
gi|29150153 - gi|29150153|emb|CAD79597.1| calcium-sensing GFP analog [synthetic construct]
 1.0E-76 [4..159] [264..416]
CALM3_PETHY - Calmodulin-related protein OS=Petunia hybrida GN=CAM53 PE=2 SV=2
 2.0E-65 [8..158] [1..148]
gi|30683369 - gi|30683369|ref|NP_850097.1| CAM5 (CALMODULIN 5); calcium ion binding [Arabidopsis thaliana]
 2.0E-65 [8..159] [1..149]
CALM_SPIOL - (P04353) Calmodulin (CaM)
 1.0E-63 [12..159] [4..148]
CALM_EPIAK - Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3
 3.0E-63 [8..159] [1..149]
gi|66360462, gi|... - gi|66360462|pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) Truncation Mutant, Ef...
gi|14250065, gi|... - gi|66360530|pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmo...
 3.0E-63 [8..159] [1..149]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 7.0E-63 [9..159] [1..148]
CALM_MYXGL - Calmodulin OS=Myxine glutinosa PE=2 SV=3
 8.0E-63 [8..159] [1..149]

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Predicted Domain #1
Region A:
Residues: [1-88] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHSESLTFN QLTQDYINKL KDAFQMLDED EDGLISRGDL TKIYATLGKT LTDEEWSKMV  60
   61 PDNDTSTAEV GEEGVSFPIF LSIMGKNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 126.70927
Match: 1iq5A_
Description: Calmodulin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [89-163] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQFPEREELE ESLKAIGRGH DLNVPLNEVI DSLKEAGFEN PEEEFAKLFK LFTTNQQATE  60
   61 ERTFRGKLFL DSITD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 126.70927
Match: 1iq5A_
Description: Calmodulin
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle