| Protein: | VPS66 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 300 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VPS66.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-86 | [1..300] | [1..300] |
|
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6.0E-59 | [1..296] | [1..331] |
|
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1.0E-54 | [1..297] | [1..339] |
|
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2.0E-47 | [36..298] | [3..285] |
|
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4.0E-44 | [26..210] | [158..363] |
|
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7.0E-41 | [26..210] | [139..344] |
|
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9.0E-40 | [19..233] | [72..307] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MEKYTNWRDN GTGIAPFLPN TIRKPSKVMT ACLLGILGVK TIIMLPLIML YLLTGQNNLL 60
61 GLILKFTFSW KEEITVQGIK KRDVRKSKHY PQKGKLYICN CTSPLDAFSV VLLAQGPVTL 120
121 LVPSNDIVYK VSIREFINFI LAGGLDIKLY GHEVAELSQL GNTVNFMFAE GTSCNGKSVL 180
181 PFSITGKKLK EFIDPSITTM NPAMA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [206-300] |
1 11 21 31 41 51
| | | | | |
1 KTKKFELQTI QIKTNKTAIT TLPISNMEYL SRFLNKGINV KCKINEPQVL SDNLEELRVA 60
61 LNGGDKYKLV SRKLDVESKR NFVKEYISDQ RKKRK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.872 | 0.113 | protein targeting to vacuole | c.23.1 | CheY-like |
| View | Download | 0.789 | 0.113 | protein targeting to vacuole | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.704 | 0.113 | protein targeting to vacuole | c.23.13 | Type II 3-dehydroquinate dehydratase |
| View | Download | 0.668 | 0.113 | protein targeting to vacuole | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.649 | 0.113 | protein targeting to vacuole | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.644 | 0.113 | protein targeting to vacuole | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.629 | 0.113 | protein targeting to vacuole | c.23.1 | CheY-like |
| View | Download | 0.618 | 0.113 | protein targeting to vacuole | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.600 | 0.113 | protein targeting to vacuole | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.593 | 0.113 | protein targeting to vacuole | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.571 | 0.113 | protein targeting to vacuole | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.567 | 0.113 | protein targeting to vacuole | d.79.3 | L30e-like |
| View | Download | 0.546 | 0.113 | protein targeting to vacuole | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.524 | 0.113 | protein targeting to vacuole | c.23.1 | CheY-like |
| View | Download | 0.520 | 0.113 | protein targeting to vacuole | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.473 | 0.113 | protein targeting to vacuole | d.68.4 | YhbY-like |
| View | Download | 0.461 | 0.113 | protein targeting to vacuole | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.455 | 0.113 | protein targeting to vacuole | d.94.1 | HPr-like |
| View | Download | 0.450 | 0.113 | protein targeting to vacuole | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.448 | 0.113 | protein targeting to vacuole | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.434 | 0.113 | protein targeting to vacuole | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.433 | 0.113 | protein targeting to vacuole | c.23.5 | Flavoproteins |
| View | Download | 0.403 | 0.113 | protein targeting to vacuole | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.382 | 0.113 | protein targeting to vacuole | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.381 | 0.113 | protein targeting to vacuole | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.373 | 0.113 | protein targeting to vacuole | c.51.3 | B12-dependend dehydatases associated subunit |
| View | Download | 0.373 | 0.113 | protein targeting to vacuole | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.356 | 0.113 | protein targeting to vacuole | a.156.1 | S13-like H2TH domain |
| View | Download | 0.348 | 0.113 | protein targeting to vacuole | c.55.5 | MTH1175-like |
| View | Download | 0.347 | 0.113 | protein targeting to vacuole | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.342 | 0.113 | protein targeting to vacuole | d.198.1 | Type III secretory system chaperone |
| View | Download | 0.337 | 0.113 | protein targeting to vacuole | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.333 | 0.113 | protein targeting to vacuole | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.325 | 0.113 | protein targeting to vacuole | a.60.2 | RuvA domain 2-like |
| View | Download | 0.324 | 0.113 | protein targeting to vacuole | c.115.1 | Hypothetical protein MTH777 (MT0777) |
| View | Download | 0.320 | 0.113 | protein targeting to vacuole | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.320 | 0.113 | protein targeting to vacuole | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.311 | 0.113 | protein targeting to vacuole | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.310 | 0.113 | protein targeting to vacuole | a.74.1 | Cyclin-like |
| View | Download | 0.307 | 0.113 | protein targeting to vacuole | c.46.1 | Rhodanese/Cell cycle control phosphatase |
| View | Download | 0.305 | 0.113 | protein targeting to vacuole | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.302 | 0.113 | protein targeting to vacuole | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.300 | 0.113 | protein targeting to vacuole | d.68.3 | SirA-like |
| View | Download | 0.290 | 0.113 | protein targeting to vacuole | d.68.7 | R3H domain |
| View | Download | 0.287 | 0.113 | protein targeting to vacuole | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.286 | 0.113 | protein targeting to vacuole | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.283 | 0.113 | protein targeting to vacuole | d.74.4 | Prokaryotic AspRS, insert domain |
| View | Download | 0.282 | 0.113 | protein targeting to vacuole | d.58.13 | Anticodon-binding domain of PheRS |
| View | Download | 0.267 | 0.113 | protein targeting to vacuole | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.266 | 0.113 | protein targeting to vacuole | d.79.2 | Tubulin/Dihydroxyacetone kinase C-terminal domain |
| View | Download | 0.265 | 0.113 | protein targeting to vacuole | c.55.5 | MTH1175-like |
| View | Download | 0.265 | 0.113 | protein targeting to vacuole | b.55.1 | PH domain-like |
| View | Download | 0.261 | 0.113 | protein targeting to vacuole | b.84.1 | Single hybrid motif |
| View | Download | 0.259 | 0.113 | protein targeting to vacuole | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.258 | 0.113 | protein targeting to vacuole | c.47.1 | Thioredoxin-like |
| View | Download | 0.253 | 0.113 | protein targeting to vacuole | c.23.3 | Hypothetical protein MTH538 |
| View | Download | 0.250 | 0.113 | protein targeting to vacuole | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.239 | 0.113 | protein targeting to vacuole | c.36.1 | Thiamin diphosphate-binding fold (THDP-binding) |
| View | Download | 0.232 | 0.113 | protein targeting to vacuole | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.231 | 0.113 | protein targeting to vacuole | d.58.34 | Formiminotransferase domain of formiminotransferase-cyclodeaminase. |
| View | Download | 0.228 | 0.113 | protein targeting to vacuole | c.23.5 | Flavoproteins |
| View | Download | 0.227 | 0.113 | protein targeting to vacuole | c.23.4 | Succinyl-CoA synthetase domains |
| View | Download | 0.227 | 0.113 | protein targeting to vacuole | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.221 | 0.113 | protein targeting to vacuole | c.84.1 | Phosphoglucomutase, first 3 domains |
| View | Download | 0.216 | 0.113 | protein targeting to vacuole | a.22.1 | Histone-fold |
| View | Download | 0.215 | 0.113 | protein targeting to vacuole | d.211.1 | Ankyrin repeat |
| View | Download | 0.212 | 0.113 | protein targeting to vacuole | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.211 | 0.113 | protein targeting to vacuole | b.1.11 | PapD-like |
| View | Download | 0.211 | 0.113 | protein targeting to vacuole | c.30.1 | PreATP-grasp domain |
| View | Download | 0.210 | 0.113 | protein targeting to vacuole | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.207 | 0.113 | protein targeting to vacuole | c.49.1 | Pyruvate kinase, C-terminal domain |
| View | Download | 0.204 | 0.113 | protein targeting to vacuole | a.60.1 | SAM/Pointed domain |
| View | Download | 0.203 | 0.113 | protein targeting to vacuole | d.169.1 | C-type lectin-like |
| View | Download | 0.203 | 0.113 | protein targeting to vacuole | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
