| Protein: | YLH47 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 454 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YLH47.
| Description | E-value | Query Range |
Subject Range |
|
|
545.0 | [0..1] | [454..1] |
|
|
482.0 | [0..21] | [444..89] |
|
|
479.0 | [0..21] | [447..88] |
|
|
474.0 | [0..20] | [444..74] |
|
|
469.0 | [0..21] | [444..88] |
|
|
462.0 | [0..21] | [444..89] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MLKYRSLPIK RAIHHPAPGI TPISPRIMVS RLRVIPSFNL KFNRWNSSVP ESSKKELKTT 60
61 DGNQESASKV SPVKEKEKVP FKVKMQKALR HYWDGSKLLG LEIKISSKLL MKSAAGYPLT 120
121 RRENLQLKRT TQDIVRLVPF AAFLIIPFAE LLLPFALKLF PNLLPSTYES SKKRENKLEN 180
181 LRNTRKLMSE IIKNNKSHFK PNNISEEQKA LFNRFYTHVR ATGVPESRQQ LIEVARLFTD 240
241 DTVLDNVTRP YLIALAKYMN LQPFGTDVML RYRIRYKMLE LKKDDLSIYY EDAEQLSLSE 300
301 LKTACASRGI RSVDVEPSVL YSNLRLWLNM RLKDKIPSTL LIMATAYNYG NVQS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [355-454] |
1 11 21 31 41 51
| | | | | |
1 KESLYDALCD VLIGIPDELY HEVKVNVVKE DEASAKQKLK QLREQEEIMK EEEQQEENAI 60
61 VSVKDELSLD DQDKNIDAAA PDVKPHDTKP IGEAAAIKEK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.573 | a.278.1 | Description not found. |
| View | Download | 0.471 | a.29.16 | Description not found. |
| View | Download | 0.382 | a.246.2 | Description not found. |
| View | Download | 0.367 | a.25.1 | Ferritin-like |
| View | Download | 0.356 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.356 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.265 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.257 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.241 | d.168.1 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |
| View | Download | 0.235 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
